| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g02255 | 3:31,195,710-31,196,238 | + | C2H3g01155 | - | - | Os03g0800900 | - | Detail |
| C1H3g00648 | 3:31,196,402-31,198,824 | + | C2H3g25793 | CX3g026772 | LOC_Os03g58690 | Os03g0801500 | - | Detail |
| C1H3g06085 | 3:31,200,922-31,209,162 | + | C2H3g03346 | CX3g030423 | LOC_Os03g58700 | Os03g0801600 | - | Detail |
| C1H3g07389 | 3:31,209,469-31,212,779 | - | C2H3g21897 | CX3g026599 | LOC_Os03g58710 | Os03g0801700 | - | Detail |
| C1H3g31741 | 3:31,213,738-31,220,979 | + | C2H3g02470 | CX3g026853 | LOC_Os03g58720 | Os03g0801800 | - | Detail |
| C1H3g13444 | 3:31,223,466-31,224,907 | + | C2H3g24055 | CX3g028194 | LOC_Os03g58740 | Os03g0801900 | - | Detail |
| C1H3g10797 | 3:31,230,806-31,235,349 | - | - | - | - | - | - | Detail |
| C1H3g24645 | 3:31,241,816-31,242,136 | + | C2H3g06737 | CX3g027259 | LOC_Os03g58764 | - | - | Detail |
| C1H3g27952 | 3:31,243,853-31,249,285 | - | C2H3g22987 | CX3g026467 | LOC_Os03g58780 | Os03g0802300 | - | Detail |
| C1H3g06385 | 3:31,250,638-31,252,376 | - | - | CX3g027669 | - | Os02g0608200 | - | Detail |
| C1H3g23323 | 3:31,260,131-31,262,268 | + | C2H3g07093 | CX3g029310 | LOC_Os03g58800 | Os03g0802600 | - | Detail |
| C1H3g23165 | 3:31,262,030-31,265,989 | - | C2H3g04258 | CX3g031125 | LOC_Os03g58810 | Os03g0802700 | - | Detail |
| C1H3g24318 | 3:31,266,538-31,272,702 | - | C2H3g14685 | CX3g026858 | LOC_Os03g58820 | Os03g0802800 | - | Detail |
| C1H3g09968 | 3:31,273,573-31,277,304 | - | C2H3g03398 | CX3g029318 | LOC_Os03g58830 | Os03g0802900 | - | Detail |
| C1H3g24192 | 3:31,279,443-31,282,640 | + | C2H3g17483 | CX3g027749 | LOC_Os03g58840 | Os03g0803000 | - | Detail |
| C1H3g22193 | 3:31,287,014-31,287,505 | - | C2H3g08295 | CX3g026143 | LOC_Os03g58850 | Os03g0803100 | - | Detail |
| C1H3g05018 | 3:31,291,390-31,292,591 | - | C2H3g05041 | CX3g028924 | LOC_Os03g58870 | Os03g0803200 | - | Detail |
| C1H3g28908 | 3:31,294,026-31,295,522 | - | C2H3g16436 | CX3g027844 | LOC_Os03g58880 | Os03g0803500 | - | Detail |
| C1H3g17883 | 3:31,296,502-31,298,514 | - | C2H3g25525 | CX3g027844 | LOC_Os03g58890 | Os03g0803500 | - | Detail |
| C1H3g28909 | 3:31,299,876-31,303,002 | - | C2H3g12180 | CX3g027632 | LOC_Os03g58900 | Os03g0803600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053110 | 8:4,228,269-4,229,168 | + | C1H8g31780 | - | LOC_Os08g08850 | Os08g0187900 | - | Detail |
| CX8g050538 | 8:4,231,447-4,233,621 | - | C1H8g04609 | C2H8g10331 | LOC_Os08g08860 | Os08g0188000 | - | Detail |
| CX8g053351 | 8:4,341,675-4,345,824 | - | C1H8g24041 | C2H8g21178 | LOC_Os08g09100 | Os08g0190200 | - | Detail |
| CX8g053035 | 8:4,347,879-4,352,299 | - | C1H8g29235 | C2H8g23289 | LOC_Os08g09110 | Os08g0190300 | - | Detail |
| CX8g052689 | 8:4,373,146-4,373,307 | - | - | - | - | - | - | Detail |
| CX8g053094 | 8:4,376,330-4,376,635 | - | C1H8g12481 | C2H8g00315 | - | Os08g0112500 | - | Detail |
| CX8g052256 | 8:4,386,605-4,387,108 | + | - | C2H8g16113 | LOC_Os08g09170 | Os08g0190500 | - | Detail |
| CX8g052757 | 8:4,387,973-4,389,755 | + | C1H8g09145 | C2H8g16113 | LOC_Os08g09170 | Os08g0190700 | - | Detail |
| CX8g054211 | 8:4,391,551-4,393,221 | - | C1H8g23743 | C2H8g27218 | LOC_Os08g09180 | Os08g0190800 | - | Detail |
| CX8g054709 | 8:4,395,890-4,397,257 | + | C1H8g04761 | C2H8g07702 | LOC_Os08g09190 | Os08g0191000 | - | Detail |
| CX8g052864 | 8:4,400,049-4,406,863 | - | C1H8g07831 | C2H8g22469 | LOC_Os08g09200 | Os08g0191100 | OsACO2, OsACO1 | Detail |
| CX8g053274 | 8:4,426,736-4,429,925 | + | C1H8g29592 | - | LOC_Os08g09210 | Os08g0191200 | VAL1, GARS | Detail |
| CX8g050571 | 8:4,433,751-4,434,785 | - | C1H8g30550 | C2H8g24964 | LOC_Os08g09220 | Os08g0191300 | - | Detail |
| CX8g053706 | 8:4,441,570-4,452,408 | + | C1H8g21948 | C2H8g19186 | LOC_Os08g09230 | Os08g0191433 | SSIIIa | Detail |
| CX8g050617 | 8:4,455,009-4,456,005 | + | C1H8g08524 | C2H8g11878 | LOC_Os08g09240 | Os08g0191600 | OsATG8c | Detail |
| CX8g050515 | 8:4,463,557-4,466,111 | - | C1H8g00665 | C2H8g14452 | LOC_Os08g09250 | Os08g0191700 | GLYI-11, OsGLYI11.1, OsGLYI11, GLYI11 | Detail |
| CX8g053640 | 8:4,468,922-4,473,671 | - | C1H8g00262 | C2H8g14452 | LOC_Os08g09260 | Os08g0191800 | - | Detail |
| CX8g053519 | 8:4,474,103-4,478,415 | + | C1H8g01175 | C2H8g00960 | LOC_Os08g09270 | Os08g0191900 | CDE4 | Detail |
| CX8g052996 | 8:4,486,428-4,487,886 | + | C1H8g08962 | C2H8g21875 | LOC_Os08g09300 | Os08g0192200 | - | Detail |
| CX8g054452 | 8:4,491,554-4,494,437 | - | C1H8g23476 | C2H8g22310 | LOC_Os08g09320 | Os08g0192400 | - | Detail |