| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g26147 | 3:29,070,012-29,073,995 | - | C2H3g04730 | CX3g031002 | LOC_Os03g54160 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| C1H3g02420 | 3:29,085,506-29,088,803 | - | C2H3g23019 | CX3g026708 | LOC_Os03g54160 | Os03g0752800 | MADS14, OsMADS14, FDRMADS6, RMADS211, AGL10, RAP1B | Detail |
| C1H3g27451 | 3:29,096,276-29,101,760 | - | C2H3g26552 | CX3g031002 | LOC_Os03g54170 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| C1H3g02242 | 3:29,102,198-29,102,386 | - | C2H3g26951 | CX3g031002 | LOC_Os03g54170 | Os03g0753100 | PAP2, MADS34, OsMADS34, RMADS212/RMADS217/RMADS221, OsPAP2/MADS34, MADS34/PAP2 | Detail |
| C1H3g27471 | 3:29,119,242-29,120,381 | + | C2H3g04287 | CX3g026043 | - | - | - | Detail |
| C1H3g27092 | 3:29,121,877-29,125,562 | - | C2H3g04194 | CX3g027702 | LOC_Os03g54750 | Os03g0754500 | - | Detail |
| C1H3g31483 | 3:29,129,030-29,132,412 | + | C2H3g28760 | CX3g030330 | LOC_Os03g54760 | Os03g0754800 | - | Detail |
| C1H3g01206 | 3:29,134,980-29,139,800 | + | C2H3g21643 | CX3g030692 | LOC_Os03g54770 | Os03g0754900 | - | Detail |
| C1H3g11086 | 3:29,140,364-29,149,350 | + | C2H3g21643 | CX3g030684 | LOC_Os03g54780 | Os03g0755000 | - | Detail |
| C1H3g02500 | 3:29,150,305-29,155,599 | + | C2H3g18088 | CX3g030008 | LOC_Os03g54790 | Os03g0755900 | - | Detail |
| C1H3g16167 | 3:29,158,887-29,161,287 | + | C2H3g29659 | CX3g026242 | LOC_Os03g54870 | Os03g0755600 | - | Detail |
| C1H3g22849 | 3:29,162,291-29,163,604 | + | C2H3g29659 | - | LOC_Os03g54860 | Os03g0755625 | - | Detail |
| C1H3g28843 | 3:29,167,429-29,168,265 | + | C2H3g18088 | CX3g030008 | LOC_Os03g54790 | Os03g0755100 | ALS1, OsALS1, OsABCB25 | Detail |
| C1H3g23278 | 3:29,173,703-29,175,359 | + | C2H3g30501 | CX7g046958 | LOC_Os03g54890 | Os03g0756000 | - | Detail |
| C1H3g18285 | 3:29,177,473-29,182,434 | - | C2H3g18957 | CX3g029420 | LOC_Os03g54900 | Os03g0756200 | - | Detail |
| C1H3g24157 | 3:29,187,079-29,188,859 | - | C2H3g16088 | CX3g031296 | LOC_Os03g54910 | Os03g0756300 | - | Detail |
| C1H3g08569 | 3:29,191,173-29,194,316 | - | C2H3g07304 | CX3g026830 | LOC_Os03g54920 | Os03g0756400 | - | Detail |
| C1H3g25183 | 3:29,195,731-29,202,063 | - | C2H3g22264 | CX3g027104 | LOC_Os03g54930 | Os03g0756500 | - | Detail |
| C1H3g07989 | 3:29,206,938-29,212,229 | - | C2H3g18479 | CX3g027732 | LOC_Os03g54970 | Os03g0756700 | - | Detail |
| C1H3g04866 | 3:29,212,412-29,216,380 | + | C2H3g11581 | CX3g030336 | LOC_Os03g54980 | Os03g0756800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053110 | 8:4,228,269-4,229,168 | + | C1H8g31780 | - | LOC_Os08g08850 | Os08g0187900 | - | Detail |
| CX8g050538 | 8:4,231,447-4,233,621 | - | C1H8g04609 | C2H8g10331 | LOC_Os08g08860 | Os08g0188000 | - | Detail |
| CX8g053351 | 8:4,341,675-4,345,824 | - | C1H8g24041 | C2H8g21178 | LOC_Os08g09100 | Os08g0190200 | - | Detail |
| CX8g053035 | 8:4,347,879-4,352,299 | - | C1H8g29235 | C2H8g23289 | LOC_Os08g09110 | Os08g0190300 | - | Detail |
| CX8g052689 | 8:4,373,146-4,373,307 | - | - | - | - | - | - | Detail |
| CX8g053094 | 8:4,376,330-4,376,635 | - | C1H8g12481 | C2H8g00315 | - | Os08g0112500 | - | Detail |
| CX8g052256 | 8:4,386,605-4,387,108 | + | - | C2H8g16113 | LOC_Os08g09170 | Os08g0190500 | - | Detail |
| CX8g052757 | 8:4,387,973-4,389,755 | + | C1H8g09145 | C2H8g16113 | LOC_Os08g09170 | Os08g0190700 | - | Detail |
| CX8g054211 | 8:4,391,551-4,393,221 | - | C1H8g23743 | C2H8g27218 | LOC_Os08g09180 | Os08g0190800 | - | Detail |
| CX8g054709 | 8:4,395,890-4,397,257 | + | C1H8g04761 | C2H8g07702 | LOC_Os08g09190 | Os08g0191000 | - | Detail |
| CX8g052864 | 8:4,400,049-4,406,863 | - | C1H8g07831 | C2H8g22469 | LOC_Os08g09200 | Os08g0191100 | OsACO2, OsACO1 | Detail |
| CX8g053274 | 8:4,426,736-4,429,925 | + | C1H8g29592 | - | LOC_Os08g09210 | Os08g0191200 | VAL1, GARS | Detail |
| CX8g050571 | 8:4,433,751-4,434,785 | - | C1H8g30550 | C2H8g24964 | LOC_Os08g09220 | Os08g0191300 | - | Detail |
| CX8g053706 | 8:4,441,570-4,452,408 | + | C1H8g21948 | C2H8g19186 | LOC_Os08g09230 | Os08g0191433 | SSIIIa | Detail |
| CX8g050617 | 8:4,455,009-4,456,005 | + | C1H8g08524 | C2H8g11878 | LOC_Os08g09240 | Os08g0191600 | OsATG8c | Detail |
| CX8g050515 | 8:4,463,557-4,466,111 | - | C1H8g00665 | C2H8g14452 | LOC_Os08g09250 | Os08g0191700 | GLYI-11, OsGLYI11.1, OsGLYI11, GLYI11 | Detail |
| CX8g053640 | 8:4,468,922-4,473,671 | - | C1H8g00262 | C2H8g14452 | LOC_Os08g09260 | Os08g0191800 | - | Detail |
| CX8g053519 | 8:4,474,103-4,478,415 | + | C1H8g01175 | C2H8g00960 | LOC_Os08g09270 | Os08g0191900 | CDE4 | Detail |
| CX8g052996 | 8:4,486,428-4,487,886 | + | C1H8g08962 | C2H8g21875 | LOC_Os08g09300 | Os08g0192200 | - | Detail |
| CX8g054452 | 8:4,491,554-4,494,437 | - | C1H8g23476 | C2H8g22310 | LOC_Os08g09320 | Os08g0192400 | - | Detail |