| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15273 | 5:3,831,454-3,832,605 | - | C2H5g24682 | CX5g040319 | LOC_Os05g08540 | Os05g0178100 | GA3OX1, OsGA3ox1, GA3ox1, OsGA3OX1 | Detail |
| C1H5g24081 | 5:3,834,404-3,835,475 | - | C2H5g23593 | CX5g038579 | LOC_Os05g08550 | - | - | Detail |
| C1H5g18416 | 5:3,836,538-3,838,831 | - | C2H5g22086 | - | - | Os05g0178300 | - | Detail |
| C1H5g28500 | 5:3,840,108-3,843,426 | - | C2H5g19576 | CX5g037936 | LOC_Os05g08560 | Os05g0178400 | - | Detail |
| C1H5g30909 | 5:3,849,015-3,851,278 | - | C2H5g23931 | CX5g039091 | LOC_Os05g08570 | Os05g0178600 | - | Detail |
| C1H5g11220 | 5:3,851,313-3,851,564 | - | C2H5g20930 | CX5g038646 | - | Os05g0178600 | - | Detail |
| C1H5g28275 | 5:3,874,896-3,878,806 | + | C2H5g20358 | CX5g038400 | LOC_Os05g08600 | Os05g0178900 | - | Detail |
| C1H5g03795 | 5:3,881,317-3,885,675 | + | C2H5g18108 | CX5g039771 | LOC_Os05g08610 | Os05g0179000 | - | Detail |
| C1H5g15516 | 5:3,896,992-3,897,444 | + | C2H5g28488 | - | LOC_Os08g23900 | - | - | Detail |
| C1H5g19959 | 5:3,919,187-3,921,168 | - | C2H5g17102 | CX5g037983 | LOC_Os05g08640 | Os05g0179300 | - | Detail |
| C1H5g21520 | 5:3,945,129-3,948,203 | + | C2H5g23753 | CX5g039721 | LOC_Os05g08730 | Os05g0179800 | - | Detail |
| C1H5g27830 | 5:3,989,851-3,993,349 | - | C2H5g25802 | CX5g038350 | LOC_Os05g08790 | Os05g0180400 | - | Detail |
| C1H5g02747 | 5:3,994,282-3,997,197 | - | C2H5g06685 | CX5g037875 | LOC_Os05g08800 | Os05g0180500 | - | Detail |
| C1H5g20076 | 5:4,011,392-4,022,845 | - | C2H5g05984 | CX5g036876 | LOC_Os05g08810 | Os05g0180600 | - | Detail |
| C1H5g03323 | 5:4,025,285-4,026,384 | + | C2H5g03050 | CX5g037205 | LOC_Os05g08820 | Os05g0180700 | - | Detail |
| C1H5g21276 | 5:4,036,621-4,042,595 | + | C2H5g11956 | CX5g037851 | LOC_Os05g08840 | Os05g0181000 | - | Detail |
| C1H5g29149 | 5:4,046,721-4,047,724 | - | C2H5g06572 | CX5g037202 | LOC_Os05g08854 | Os05g0181250 | - | Detail |
| C1H5g20825 | 5:4,075,430-4,079,590 | - | C2H5g07455 | CX10g010048 | - | - | - | Detail |
| C1H5g24930 | 5:4,088,887-4,091,504 | - | C2H5g23526 | CX5g038397 | LOC_Os05g08930 | Os05g0182100 | - | Detail |
| C1H5g10054 | 5:4,093,343-4,097,173 | - | C2H5g19515 | CX5g038109 | LOC_Os05g08950 | Os05g0182201 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053906 | 8:3,749,268-3,749,765 | - | C1H8g13263 | - | - | - | - | Detail |
| CX8g052343 | 8:3,753,942-3,756,349 | + | C1H8g23188 | C2H8g10636 | LOC_Os08g08020 | Os08g0177500 | - | Detail |
| CX8g051909 | 8:3,760,803-3,766,812 | - | C1H8g25646 | C2H8g27757 | LOC_Os08g08030 | Os08g0177600 | - | Detail |
| CX8g052860 | 8:3,770,006-3,770,212 | - | - | - | - | - | - | Detail |
| CX8g052297 | 8:3,772,461-3,777,572 | + | C1H8g22143 | C2H8g12682 | LOC_Os08g08040 | Os08g0177700 | - | Detail |
| CX8g051264 | 8:3,779,467-3,782,860 | - | C1H8g08080 | C2H8g01541 | LOC_Os08g08050 | Os08g0177800 | - | Detail |
| CX8g051382 | 8:3,783,599-3,783,778 | + | - | - | - | Os04g0479550 | - | Detail |
| CX8g053176 | 8:3,786,338-3,795,583 | + | C1H8g22685 | C2H8g23316 | LOC_Os08g08060 | Os08g0178100 | - | Detail |
| CX8g053500 | 8:3,796,695-3,798,254 | + | C1H8g20183 | - | LOC_Os08g08070 | Os08g0178200 | OsMST5 | Detail |
| CX8g053780 | 8:3,802,004-3,805,990 | + | C1H8g27741 | C2H8g27852 | LOC_Os08g08080 | Os08g0178300 | - | Detail |
| CX8g054587 | 8:3,808,825-3,809,121 | + | - | C2H8g25679 | LOC_Os08g08090 | Os08g0178500 | - | Detail |
| CX8g051589 | 8:3,810,316-3,812,030 | + | - | C2H8g27439 | LOC_Os08g08100 | Os08g0178600 | - | Detail |
| CX8g052777 | 8:3,817,126-3,821,936 | - | C1H8g22470 | C2H8g11322 | LOC_Os08g08110 | Os08g0178700 | - | Detail |
| CX8g053902 | 8:3,829,703-3,830,788 | - | C1H8g21821 | C2H8g15306 | LOC_Os08g08120 | Os08g0178800 | - | Detail |
| CX8g050480 | 8:3,842,925-3,843,200 | + | - | - | - | - | - | Detail |
| CX8g051039 | 8:3,846,248-3,853,652 | + | C1H8g07349 | C2H8g14644 | LOC_Os08g08140 | Os08g0179150 | SDRLP-1 | Detail |
| CX8g053055 | 8:3,858,834-3,859,061 | + | - | - | LOC_Os08g20885 | Os12g0584700 | - | Detail |
| CX8g053476 | 8:3,862,808-3,866,591 | - | C1H8g10819 | C2H8g09574 | LOC_Os08g08160 | Os08g0179400 | - | Detail |
| CX8g052928 | 8:3,875,257-3,875,565 | - | C1H8g13796 | - | - | - | - | Detail |
| CX8g054351 | 8:3,882,131-3,884,517 | + | C1H8g10445 | C2H8g18242 | LOC_Os08g08190 | Os08g0179900 | - | Detail |