| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08811 | 1:22,727,992-22,729,387 | + | C2H1g24347 | CX1g000338 | LOC_Os01g44090 | Os01g0631500 | - | Detail |
| C1H1g07009 | 1:22,749,888-22,754,361 | + | C2H1g14152 | CX1g001009 | LOC_Os01g44110 | Os01g0631700 | - | Detail |
| C1H1g05320 | 1:22,758,481-22,764,326 | + | C2H1g16370 | CX1g000935 | LOC_Os01g44130 | Os01g0631900 | - | Detail |
| C1H1g12869 | 1:22,778,149-22,779,192 | + | C2H1g06740 | - | - | - | - | Detail |
| C1H1g13707 | 1:22,789,394-22,789,909 | - | C2H1g03548 | - | LOC_Os01g44210 | Os01g0633000 | - | Detail |
| C1H1g09519 | 1:22,799,911-22,808,100 | + | C2H1g23506 | CX1g000578 | LOC_Os01g44220 | Os01g0633100 | AGPL2, OsAGPL2, osagpl2, APL2, OsAPL2, AGPiso, sh2, Sh2 | Detail |
| C1H1g25629 | 1:22,809,738-22,813,559 | + | C2H1g25610 | CX1g004196 | LOC_Os01g44230 | Os01g0633200 | - | Detail |
| C1H1g17417 | 1:22,815,019-22,817,459 | + | C2H1g21259 | CX1g001984 | LOC_Os01g44250 | Os01g0633400 | - | Detail |
| C1H1g26792 | 1:22,822,413-22,824,342 | + | C2H1g13154 | CX1g005798 | LOC_Os01g44260 | Os01g0633500 | Rd, DFR | Detail |
| C1H1g26567 | 1:22,827,646-22,835,145 | - | C2H1g30459 | CX1g002472 | LOC_Os01g44310 | Os01g0634300 | - | Detail |
| C1H1g01839 | 1:22,861,358-22,863,345 | - | C2H1g20909 | CX1g002072 | LOC_Os01g44330 | Os01g0634500 | - | Detail |
| C1H1g04340 | 1:22,864,879-22,866,443 | - | C2H1g10174 | CX1g000429 | LOC_Os01g44340 | Os01g0634600 | - | Detail |
| C1H1g02990 | 1:22,868,213-22,870,234 | + | C2H1g02801 | CX1g003750 | LOC_Os01g44360 | Os01g0634900 | - | Detail |
| C1H1g03527 | 1:22,887,199-22,890,609 | + | C2H1g14029 | CX1g001073 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C1H1g07657 | 1:22,892,905-22,894,371 | + | C2H1g03825 | CX8g052292 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C1H1g22176 | 1:22,898,659-22,904,337 | - | C2H1g05065 | CX1g000646 | LOC_Os01g44430 | Os01g0635600 | - | Detail |
| C1H1g27414 | 1:22,918,386-22,920,878 | - | C2H1g18946 | CX1g003935 | LOC_Os01g44960 | Os01g0636400 | - | Detail |
| C1H1g00331 | 1:22,930,406-22,934,280 | + | C2H1g07403 | CX1g001605 | LOC_Os01g44970 | Os01g0636500 | - | Detail |
| C1H1g13180 | 1:22,936,336-22,939,660 | - | C2H1g22263 | CX1g007252 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| C1H1g21245 | 1:22,943,227-22,944,039 | + | C2H1g15078 | CX1g000311 | LOC_Os01g45090 | Os01g0637800 | OsMYB305 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g054418 | 8:3,548,029-3,548,571 | + | C1H8g10489 | - | LOC_Os08g07660 | Os08g0173300 | OsPROPEP3 | Detail |
| CX8g051342 | 8:3,550,647-3,551,279 | + | C1H8g29637 | - | LOC_Os08g07660 | Os08g0173300 | OsPROPEP3 | Detail |
| CX8g051401 | 8:3,561,398-3,561,988 | + | C1H8g00075 | C2H8g28564 | LOC_Os08g07690 | Os08g0173600 | - | Detail |
| CX8g054748 | 8:3,563,373-3,563,933 | - | C1H8g09003 | C2H8g18318 | LOC_Os08g07700 | Os08g0173700 | - | Detail |
| CX8g054024 | 8:3,577,112-3,579,383 | - | C1H8g31858 | C2H8g04426 | LOC_Os08g07720 | Os08g0174100 | - | Detail |
| CX8g053484 | 8:3,584,472-3,587,995 | + | C1H8g15992 | C2H8g16815 | LOC_Os08g07730 | Os08g0174300 | - | Detail |
| CX8g051107 | 8:3,592,186-3,593,043 | - | C1H8g20669 | - | LOC_Os08g07740 | Os08g0174500 | - | Detail |
| CX8g051452 | 8:3,601,938-3,607,651 | + | C1H8g15478 | C2H8g13833 | LOC_Os08g07760 | Os08g0174700 | TBP1, OsSERK1, OsBAK1 | Detail |
| CX8g051666 | 8:3,609,910-3,611,679 | + | C1H8g30556 | C2H8g22237 | LOC_Os08g07790 | Os08g0174900 | - | Detail |
| CX8g053866 | 8:3,617,551-3,619,455 | + | - | - | LOC_Os08g07810 | Os08g0175000 | - | Detail |
| CX8g053787 | 8:3,630,366-3,636,179 | - | C1H8g22794 | - | - | Os08g0233900 | - | Detail |
| CX8g051477 | 8:3,645,211-3,647,926 | - | C1H8g26222 | C2H8g22041 | LOC_Os08g07830 | Os08g0175200 | - | Detail |
| CX8g050555 | 8:3,648,654-3,648,806 | - | - | - | - | Os01g0728000 | - | Detail |
| CX8g051168 | 8:3,650,450-3,659,347 | - | C1H8g23676 | C2H8g06438 | LOC_Os08g07840 | Os08g0175300 | - | Detail |
| CX8g053761 | 8:3,666,438-3,675,852 | - | C1H8g23676 | C2H8g06438 | LOC_Os08g07850 | Os08g0175300 | - | Detail |
| CX8g052908 | 8:3,682,627-3,685,660 | + | C1H8g17075 | C2H8g22318 | LOC_Os08g07880 | Os08g0176100 | - | Detail |
| CX8g051618 | 8:3,694,694-3,698,438 | + | C1H8g26882 | C2H8g03160 | LOC_Os08g07950 | Os08g0174800 | - | Detail |
| CX8g052292 | 8:3,702,433-3,706,889 | - | C1H8g15718 | C2H8g26154 | LOC_Os08g07960 | Os08g0176800 | - | Detail |
| CX8g053546 | 8:3,711,477-3,713,270 | - | C1H8g24142 | C2H8g04160 | LOC_Os08g07970 | Os08g0176900 | - | Detail |
| CX8g051024 | 8:3,731,210-3,744,278 | - | C1H8g16045 | C2H8g23613 | LOC_Os08g08000 | Os08g0177300 | - | Detail |