| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03424 | 6:24,408,283-24,409,997 | - | C1H6g04835 | CX6g042765 | LOC_Os06g46030 | Os06g0672400 | OsG1L2 | Detail |
| C2H6g12858 | 6:24,422,938-24,423,922 | - | - | - | - | - | - | Detail |
| C2H6g07492 | 6:24,427,959-24,428,420 | - | C1H6g06589 | CX6g042065 | - | Os06g0531000 | - | Detail |
| C2H6g20505 | 6:24,434,698-24,435,501 | - | C1H6g00429 | - | LOC_Os06g46120 | Os06g0673300 | - | Detail |
| C2H6g02105 | 6:24,435,643-24,437,220 | + | - | CX6g042455 | - | - | - | Detail |
| C2H6g16269 | 6:24,436,756-24,439,505 | - | C1H6g04560 | CX6g044377 | LOC_Os06g46120 | Os06g0672700 | - | Detail |
| C2H6g04402 | 6:24,445,673-24,446,671 | - | C1H6g09876 | - | LOC_Os06g46065 | Os06g0672801 | - | Detail |
| C2H6g03521 | 6:24,470,199-24,470,987 | - | C1H6g06204 | CX6g042629 | - | Os06g0674000 | - | Detail |
| C2H6g03862 | 6:24,492,016-24,494,187 | - | C1H6g14950 | CX6g044991 | - | Os06g0674000 | - | Detail |
| C2H6g02186 | 6:24,583,163-24,583,878 | + | - | - | - | - | - | Detail |
| C2H6g00947 | 6:24,634,534-24,639,823 | + | C1H6g03179 | CX6g041920 | LOC_Os06g46240 | Os06g0674800 | - | Detail |
| C2H6g16522 | 6:24,662,696-24,666,303 | + | C1H6g03218 | CX6g042717 | LOC_Os06g46270 | Os06g0675600 | OsY37, ONAC011 | Detail |
| C2H6g30405 | 6:24,669,913-24,680,390 | - | C1H6g29534 | CX6g042747 | LOC_Os06g46284 | Os06g0675700 | ONG3 | Detail |
| C2H6g20637 | 6:24,681,360-24,687,204 | - | C1H6g05961 | CX6g043872 | LOC_Os06g46310 | Os06g0676000 | NRAMP3, OsNramp3, OsNRAMP3 | Detail |
| C2H6g24034 | 6:24,708,566-24,710,624 | - | C1H6g12474 | CX6g042075 | LOC_Os06g46330 | Os06g0676600 | - | Detail |
| C2H6g04890 | 6:24,719,088-24,723,422 | + | C1H6g29534 | CX6g041293 | LOC_Os06g46340 | Os06g0676700 | - | Detail |
| C2H6g08388 | 6:24,728,689-24,734,073 | - | C1H6g30642 | CX6g042639 | LOC_Os06g46350 | Os06g0677000 | DEP3, OspPLAIIIδ | Detail |
| C2H6g24564 | 6:24,755,079-24,759,465 | + | C1H6g11720 | CX6g043789 | LOC_Os06g46366 | Os06g0677300 | - | Detail |
| C2H6g27620 | 6:24,760,581-24,763,915 | + | C1H6g31002 | CX6g045150 | LOC_Os06g46372 | Os06g0677400 | - | Detail |
| C2H6g16974 | 6:24,765,283-24,769,704 | + | C1H6g05901 | CX6g042145 | LOC_Os06g46380 | Os06g0677500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003175 | 1:28,092,742-28,094,645 | + | C1H1g13664 | C2H1g14203 | LOC_Os12g12690 | Os01g0527900 | - | Detail |
| CX1g000494 | 1:28,095,636-28,097,004 | - | C1H1g18862 | C2H1g17996 | LOC_Os12g35900 | Os01g0872900 | - | Detail |
| CX1g004570 | 1:28,098,193-28,100,096 | + | C1H1g13664 | C2H1g14203 | LOC_Os12g12690 | Os01g0527900 | - | Detail |
| CX1g006345 | 1:28,112,092-28,119,437 | + | C1H1g18828 | C2H1g04914 | LOC_Os01g54784 | Os01g0751300 | - | Detail |
| CX1g006326 | 1:28,121,283-28,121,738 | + | - | - | LOC_Os01g54800 | Os01g0751400 | - | Detail |
| CX1g003213 | 1:28,124,425-28,127,090 | - | C1H1g01340 | C2H1g10063 | LOC_Os01g54810 | Os01g0751600 | THIS1, This1 | Detail |
| CX1g001241 | 1:28,129,842-28,131,874 | + | C1H1g28508 | C2H1g08663 | LOC_Os01g54850 | Os01g0752100 | - | Detail |
| CX1g002849 | 1:28,132,159-28,135,979 | - | C1H1g19975 | C2H1g27818 | LOC_Os01g54860 | Os01g0752200 | NOG1 | Detail |
| CX1g004206 | 1:28,138,735-28,140,286 | - | C1H1g04449 | C2H1g21432 | LOC_Os01g54870 | Os01g0752300 | - | Detail |
| CX1g006705 | 1:28,141,622-28,144,045 | - | C1H1g25368 | C2H1g04122 | LOC_Os01g54880 | Os01g0752400 | - | Detail |
| CX1g000124 | 1:28,146,953-28,147,411 | + | C1H1g06977 | C2H1g00754 | LOC_Os01g54890 | Os01g0752500 | ERF92, OsERF922 | Detail |
| CX1g007206 | 1:28,148,847-28,154,760 | - | C1H1g06182 | C2H1g02082 | LOC_Os01g54900 | Os01g0752600 | - | Detail |
| CX1g004902 | 1:28,155,055-28,162,249 | + | C1H1g10866 | C2H1g30106 | LOC_Os01g54910 | Os01g0752700 | - | Detail |
| CX1g005633 | 1:28,169,691-28,172,789 | + | C1H1g31047 | C2H1g30674 | LOC_Os01g55450 | Os01g0897000 | OsCDKB1;1 | Detail |
| CX1g003710 | 1:28,174,260-28,177,205 | - | C1H1g19883 | C2H1g22228 | LOC_Os01g54920 | Os01g0752800 | - | Detail |
| CX1g004059 | 1:28,181,185-28,185,022 | - | C1H1g05885 | C2H1g29792 | LOC_Os01g54930 | Os01g0753000 | OsVOZ1 | Detail |
| CX1g000869 | 1:28,188,171-28,193,009 | + | C1H1g21710 | C2H1g17930 | LOC_Os01g54940 | Os01g0753100 | - | Detail |
| CX1g006390 | 1:28,193,982-28,196,168 | - | C1H1g22929 | C2H1g29811 | LOC_Os01g54950 | Os01g0753150 | - | Detail |
| CX1g005794 | 1:28,197,794-28,197,997 | + | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g002430 | 1:28,198,333-28,199,767 | - | C1H1g10836 | C2H1g29811 | LOC_Os01g54960 | Os01g0753200 | - | Detail |