| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09690 | 1:5,646,191-5,652,258 | + | C2H1g00290 | CX1g005289 | LOC_Os01g11860 | Os01g0217500 | - | Detail |
| C1H1g24673 | 1:5,655,098-5,657,830 | + | C2H1g04999 | CX1g006272 | LOC_Os01g11880 | Os01g0217800 | - | Detail |
| C1H1g21326 | 1:5,666,351-5,678,186 | + | C2H1g26585 | CX1g006867 | LOC_Os01g11900 | Os01g0218032 | ROS1A, ROS1a, OsROS1, TA2 | Detail |
| C1H1g12724 | 1:5,686,581-5,687,544 | + | C2H1g12652 | CX1g003932 | LOC_Os01g11910 | Os01g0218100 | - | Detail |
| C1H1g09961 | 1:5,697,241-5,702,329 | + | C2H1g17909 | CX1g004539 | LOC_Os01g11920 | Os01g0218200 | - | Detail |
| C1H1g30290 | 1:5,714,019-5,719,150 | + | C2H1g10690 | CX1g000608 | LOC_Os01g11940 | Os01g0218500 | - | Detail |
| C1H1g21863 | 1:5,720,849-5,726,981 | - | C2H1g22932 | CX1g003540 | LOC_Os01g11946 | Os01g0218700 | - | Detail |
| C1H1g28664 | 1:5,727,357-5,740,639 | - | C2H1g17937 | CX1g000915 | LOC_Os01g11960 | Os01g0218900 | - | Detail |
| C1H1g00514 | 1:5,752,538-5,753,281 | + | C2H1g09244 | CX1g004702 | LOC_Os01g11970 | Os01g0219000 | - | Detail |
| C1H1g27900 | 1:5,754,392-5,756,984 | + | C2H1g22718 | CX1g003171 | LOC_Os01g11980 | Os01g0219100 | - | Detail |
| C1H1g26992 | 1:5,757,879-5,760,734 | + | C2H1g24979 | CX1g000508 | LOC_Os01g11990 | Os01g0219200 | ZYGO1 | Detail |
| C1H1g22028 | 1:5,770,051-5,770,540 | + | C2H1g07180 | CX1g005007 | LOC_Os01g12020 | Os01g0219500 | OsLTPL18 | Detail |
| C1H1g09843 | 1:5,770,963-5,773,415 | - | C2H1g00052 | CX1g005138 | LOC_Os01g12030 | Os01g0219600 | - | Detail |
| C1H1g29203 | 1:5,784,452-5,785,325 | - | C2H1g03412 | CX1g005599 | LOC_Os01g12070 | Os01g0220100 | OsCel9A | Detail |
| C1H1g27823 | 1:5,787,226-5,790,470 | - | C2H1g03412 | CX1g005599 | LOC_Os01g12070 | Os01g0220100 | OsCel9A | Detail |
| C1H1g03057 | 1:5,794,359-5,799,394 | - | C2H1g01177 | CX1g001222 | LOC_Os01g12080 | Os01g0220200 | - | Detail |
| C1H1g21223 | 1:5,806,314-5,809,542 | + | C2H1g26925 | CX1g003024 | LOC_Os01g12090 | Os01g0220300 | - | Detail |
| C1H1g15416 | 1:5,810,071-5,810,571 | - | C2H1g24533 | - | LOC_Os01g12100 | Os01g0220400 | - | Detail |
| C1H1g25550 | 1:5,814,056-5,815,182 | - | C2H1g24521 | CX1g004887 | LOC_Os01g12110 | Os01g0220500 | - | Detail |
| C1H1g19821 | 1:5,830,205-5,830,851 | + | C2H1g00971 | CX1g004493 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003175 | 1:28,092,742-28,094,645 | + | C1H1g13664 | C2H1g14203 | LOC_Os12g12690 | Os01g0527900 | - | Detail |
| CX1g000494 | 1:28,095,636-28,097,004 | - | C1H1g18862 | C2H1g17996 | LOC_Os12g35900 | Os01g0872900 | - | Detail |
| CX1g004570 | 1:28,098,193-28,100,096 | + | C1H1g13664 | C2H1g14203 | LOC_Os12g12690 | Os01g0527900 | - | Detail |
| CX1g006345 | 1:28,112,092-28,119,437 | + | C1H1g18828 | C2H1g04914 | LOC_Os01g54784 | Os01g0751300 | - | Detail |
| CX1g006326 | 1:28,121,283-28,121,738 | + | - | - | LOC_Os01g54800 | Os01g0751400 | - | Detail |
| CX1g003213 | 1:28,124,425-28,127,090 | - | C1H1g01340 | C2H1g10063 | LOC_Os01g54810 | Os01g0751600 | THIS1, This1 | Detail |
| CX1g001241 | 1:28,129,842-28,131,874 | + | C1H1g28508 | C2H1g08663 | LOC_Os01g54850 | Os01g0752100 | - | Detail |
| CX1g002849 | 1:28,132,159-28,135,979 | - | C1H1g19975 | C2H1g27818 | LOC_Os01g54860 | Os01g0752200 | NOG1 | Detail |
| CX1g004206 | 1:28,138,735-28,140,286 | - | C1H1g04449 | C2H1g21432 | LOC_Os01g54870 | Os01g0752300 | - | Detail |
| CX1g006705 | 1:28,141,622-28,144,045 | - | C1H1g25368 | C2H1g04122 | LOC_Os01g54880 | Os01g0752400 | - | Detail |
| CX1g000124 | 1:28,146,953-28,147,411 | + | C1H1g06977 | C2H1g00754 | LOC_Os01g54890 | Os01g0752500 | ERF92, OsERF922 | Detail |
| CX1g007206 | 1:28,148,847-28,154,760 | - | C1H1g06182 | C2H1g02082 | LOC_Os01g54900 | Os01g0752600 | - | Detail |
| CX1g004902 | 1:28,155,055-28,162,249 | + | C1H1g10866 | C2H1g30106 | LOC_Os01g54910 | Os01g0752700 | - | Detail |
| CX1g005633 | 1:28,169,691-28,172,789 | + | C1H1g31047 | C2H1g30674 | LOC_Os01g55450 | Os01g0897000 | OsCDKB1;1 | Detail |
| CX1g003710 | 1:28,174,260-28,177,205 | - | C1H1g19883 | C2H1g22228 | LOC_Os01g54920 | Os01g0752800 | - | Detail |
| CX1g004059 | 1:28,181,185-28,185,022 | - | C1H1g05885 | C2H1g29792 | LOC_Os01g54930 | Os01g0753000 | OsVOZ1 | Detail |
| CX1g000869 | 1:28,188,171-28,193,009 | + | C1H1g21710 | C2H1g17930 | LOC_Os01g54940 | Os01g0753100 | - | Detail |
| CX1g006390 | 1:28,193,982-28,196,168 | - | C1H1g22929 | C2H1g29811 | LOC_Os01g54950 | Os01g0753150 | - | Detail |
| CX1g005794 | 1:28,197,794-28,197,997 | + | - | - | LOC_Os01g49630 | Os01g0728000 | - | Detail |
| CX1g002430 | 1:28,198,333-28,199,767 | - | C1H1g10836 | C2H1g29811 | LOC_Os01g54960 | Os01g0753200 | - | Detail |