| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g04613 | 3:6,241,187-6,242,617 | - | C2H3g04826 | CX3g030910 | LOC_Os03g12940 | Os03g0232000 | OsFBO13 | Detail |
| C1H3g30000 | 3:6,247,635-6,251,913 | - | C2H3g04774 | CX3g029956 | LOC_Os03g12950 | Os03g0232200 | - | Detail |
| C1H3g29239 | 3:6,268,484-6,268,779 | + | C2H4g27073 | - | - | - | - | Detail |
| C1H3g14582 | 3:6,268,806-6,269,027 | + | C2H4g11700 | CX3g029446 | - | Os02g0324200 | - | Detail |
| C1H3g07150 | 3:6,279,894-6,280,322 | + | C2H3g26123 | CX3g028212 | LOC_Os03g12990 | Os03g0232400 | - | Detail |
| C1H3g22613 | 3:6,284,313-6,284,713 | - | C2H3g04799 | CX3g028040 | - | Os02g0738300 | - | Detail |
| C1H3g28102 | 3:6,284,992-6,287,738 | + | C2H3g26449 | CX3g028651 | LOC_Os03g13000 | Os03g0232500 | - | Detail |
| C1H3g02271 | 3:6,293,199-6,294,578 | - | C2H3g15250 | CX3g031218 | LOC_Os03g13010 | Os03g0232600 | ELF1, OsPUB31, OsPUB75, TUD1, OsTUD1 | Detail |
| C1H3g01497 | 3:6,310,077-6,311,798 | - | C2H3g13166 | CX3g029569 | LOC_Os03g13030 | Os03g0232800 | - | Detail |
| C1H3g06697 | 3:6,312,892-6,316,654 | - | C2H3g05297 | CX3g027690 | LOC_Os03g13040 | Os03g0232900 | - | Detail |
| C1H3g26874 | 3:6,329,350-6,330,859 | + | C2H3g03038 | CX3g025391 | LOC_Os03g13050 | Os03g0233000 | - | Detail |
| C1H3g16800 | 3:6,332,793-6,333,953 | - | C2H3g18690 | CX3g030154 | LOC_Os03g13070 | Os03g0233200 | - | Detail |
| C1H3g06079 | 3:6,335,141-6,338,733 | - | C2H3g14812 | CX3g029185 | LOC_Os03g13080 | Os03g0233300 | OsLysM-RLK2, OsLYK5, OsNFR5/OsRLK2 | Detail |
| C1H3g06632 | 3:6,341,866-6,345,383 | + | C2H3g23005 | CX3g028548 | LOC_Os03g13100 | Os03g0233500 | - | Detail |
| C1H3g16553 | 3:6,349,440-6,353,368 | + | C2H3g09799 | CX3g029407 | LOC_Os03g13130 | Os03g0233800 | - | Detail |
| C1H3g27731 | 3:6,354,094-6,354,936 | + | C2H3g17247 | CX3g025432 | LOC_Os03g13140 | Os03g0233900 | Hb1, OsPgb1.1 | Detail |
| C1H3g19664 | 3:6,357,836-6,358,710 | + | C2H3g00667 | CX3g027207 | LOC_Os03g13150 | Os03g0234000 | - | Detail |
| C1H3g02151 | 3:6,360,956-6,361,945 | + | C2H3g02090 | CX3g030474 | LOC_Os03g13160 | Os03g0234100 | - | Detail |
| C1H3g22268 | 3:6,367,751-6,368,947 | + | C2H3g20297 | CX3g028385 | LOC_Os03g13180 | Os03g0234500 | - | Detail |
| C1H3g22029 | 3:6,370,718-6,375,395 | - | C2H3g00447 | CX3g027164 | LOC_Os03g13190 | Os03g0234600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053029 | 8:2,892,127-2,896,285 | - | C1H8g20448 | C2H8g29275 | LOC_Os08g06420 | Os08g0161500 | - | Detail |
| CX8g052524 | 8:2,906,046-2,908,299 | + | C1H8g30159 | C2H8g29093 | LOC_Os08g06430 | Os08g0161700 | - | Detail |
| CX8g050883 | 8:2,909,287-2,911,488 | + | C1H8g31449 | C2H8g25109 | LOC_Os08g06440 | Os08g0161750 | - | Detail |
| CX8g054813 | 8:2,912,431-2,914,164 | - | C1H8g01121 | C2H8g10700 | LOC_Os08g06450 | Os08g0161800 | - | Detail |
| CX8g052628 | 8:2,915,563-2,917,195 | - | C1H8g09835 | C2H8g25623 | LOC_Os08g06460 | Os08g0161900 | - | Detail |
| CX8g050900 | 8:2,919,281-2,919,433 | - | - | - | - | - | - | Detail |
| CX8g053141 | 8:2,922,177-2,926,567 | + | C1H8g06854 | C2H8g16917 | LOC_Os08g06470 | Os08g0162000 | - | Detail |
| CX8g053551 | 8:2,932,008-2,934,388 | + | C1H8g16229 | C2H8g27250 | LOC_Os08g06474 | Os08g0162033 | - | Detail |
| CX8g051418 | 8:2,944,843-2,945,343 | - | - | - | - | - | - | Detail |
| CX8g051749 | 8:2,948,956-2,949,111 | + | - | - | - | Os09g0414600 | - | Detail |
| CX8g054308 | 8:2,963,225-2,970,820 | + | C1H8g13752 | C2H8g11360 | LOC_Os08g06480 | Os08g0162100 | - | Detail |
| CX8g052228 | 8:2,972,254-2,973,861 | + | C1H8g02184 | C2H8g06197 | LOC_Os08g06490 | Os08g0162200 | - | Detail |
| CX8g053489 | 8:2,975,824-2,976,116 | + | C1H7g27141 | C2H4g24787 | - | - | - | Detail |
| CX8g052664 | 8:2,978,061-2,978,501 | - | C1H8g01730 | C2H8g08451 | - | Os08g0117800 | - | Detail |
| CX8g050667 | 8:2,978,079-2,978,675 | + | - | - | LOC_Os08g06500 | - | - | Detail |
| CX8g054667 | 8:2,979,375-2,981,483 | + | C1H8g18766 | C2H8g23300 | LOC_Os08g06500 | Os08g0162250 | - | Detail |
| CX8g050622 | 8:2,983,497-2,984,855 | - | C1H8g04612 | - | LOC_Os08g06510 | Os08g0162400 | - | Detail |
| CX8g050476 | 8:2,987,947-2,990,158 | + | C1H8g04343 | C2H8g02086 | LOC_Os08g06520 | Os08g0162500 | - | Detail |
| CX8g053601 | 8:2,991,525-2,993,765 | + | C1H8g14526 | C2H8g25309 | LOC_Os08g06530 | Os08g0162600 | - | Detail |
| CX8g053132 | 8:2,994,780-2,995,358 | + | C1H8g08906 | - | LOC_Os08g06540 | Os08g0162700 | - | Detail |