| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g05837 | 1:34,814,284-34,817,813 | - | C1H1g03400 | CX1g004760 | LOC_Os01g67770 | Os01g0904700 | RR26, OsRR26, Rrb6, Orr6, OsRR16, OsRRB6 | Detail |
| C2H1g29165 | 1:34,830,200-34,832,407 | + | C1H1g01129 | CX1g000275 | LOC_Os01g67810 | Os01g0905200 | - | Detail |
| C2H1g16521 | 1:34,833,811-34,835,983 | + | C1H1g31042 | CX1g001652 | LOC_Os01g67820 | Os01g0905300 | - | Detail |
| C2H1g29056 | 1:34,837,704-34,841,038 | - | C1H1g11384 | CX1g000161 | LOC_Os01g67830 | Os01g0905400 | - | Detail |
| C2H1g13823 | 1:34,849,593-34,852,389 | + | C1H1g03018 | CX1g004783 | LOC_Os01g67850 | Os01g0905700 | - | Detail |
| C2H1g10330 | 1:34,853,768-34,856,107 | - | C1H1g11811 | CX1g001709 | LOC_Os01g67860 | Os01g0905800 | - | Detail |
| C2H1g06722 | 1:34,859,001-34,864,128 | - | C1H1g06073 | CX1g001709 | LOC_Os01g67870 | Os01g0906000 | - | Detail |
| C2H1g09299 | 1:34,868,161-34,877,076 | - | C1H1g19357 | CX1g002463 | LOC_Os01g67880 | Os01g0906200 | - | Detail |
| C2H1g18200 | 1:34,880,705-34,886,760 | - | C1H1g19297 | CX1g003860 | LOC_Os01g67920 | Os01g0906600 | - | Detail |
| C2H1g20697 | 1:34,889,896-34,890,684 | + | C1H1g12726 | CX1g003493 | LOC_Os01g67950 | Os01g0907200 | - | Detail |
| C2H1g10610 | 1:34,893,569-34,898,685 | + | C1H1g26541 | CX1g004144 | LOC_Os01g67960 | Os01g0907300 | - | Detail |
| C2H1g19705 | 1:34,899,270-34,906,295 | + | C1H1g18538 | CX1g000822 | LOC_Os01g67970 | Os01g0907400 | JMJ705 | Detail |
| C2H1g19503 | 1:34,924,288-34,927,881 | + | C1H1g08768 | CX1g000912 | LOC_Os01g68000 | Os01g0907900 | PLA2, pla2, pla2(pla2-1, pla2-2), plt2, LHD2 | Detail |
| C2H1g14371 | 1:34,938,471-34,941,205 | - | C1H1g13810 | CX1g000788 | LOC_Os01g68010 | Os01g0908100 | - | Detail |
| C2H1g27794 | 1:34,944,440-34,948,560 | + | C1H1g00934 | CX1g002877 | LOC_Os01g68020 | Os01g0908200 | OsBT | Detail |
| C2H1g06918 | 1:34,949,685-34,950,957 | - | C1H1g26380 | CX1g005492 | LOC_Os01g68030 | Os01g0908400 | - | Detail |
| C2H1g30537 | 1:34,952,240-34,955,472 | - | C1H1g26157 | CX1g002681 | LOC_Os01g68040 | Os01g0908500 | - | Detail |
| C2H1g27819 | 1:34,962,221-34,964,922 | + | C1H1g02663 | CX1g003019 | LOC_Os01g68050 | Os01g0908600 | OsProT1 | Detail |
| C2H1g20684 | 1:34,965,284-34,969,654 | - | C1H1g28238 | CX1g003471 | LOC_Os01g68060 | Os01g0908700 | - | Detail |
| C2H1g29519 | 1:34,987,052-34,990,279 | + | C1H1g09218 | CX1g001897 | LOC_Os01g68104 | Os01g0909100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g052259 | 8:2,408,725-2,408,874 | + | - | - | - | - | - | Detail |
| CX8g052949 | 8:2,413,621-2,419,632 | + | C1H8g04038 | C2H8g20266 | LOC_Os08g05870 | Os08g0154900 | - | Detail |
| CX8g053969 | 8:2,421,074-2,424,499 | - | C1H8g01877 | C2H8g25747 | LOC_Os08g05880 | Os08g0155000 | - | Detail |
| CX8g051669 | 8:2,426,174-2,429,398 | + | C1H8g06190 | C2H8g07489 | LOC_Os08g05890 | Os08g0155100 | - | Detail |
| CX8g054829 | 8:2,441,055-2,448,621 | - | C1H8g28304 | C2H8g18829 | LOC_Os08g05910 | Os08g0155400 | OsNRT1.1A, OsNPF6.3 | Detail |
| CX8g052912 | 8:2,481,104-2,489,866 | - | C1H8g04862 | C2H8g03631 | LOC_Os08g05940 | Os08g0155700 | - | Detail |
| CX8g052572 | 8:2,500,137-2,500,439 | + | - | - | LOC_Os08g05960 | Os08g0155900 | OsDR10 | Detail |
| CX8g052981 | 8:2,503,425-2,509,915 | - | C1H8g04862 | C2H8g23096 | LOC_Os08g05940 | Os08g0155700 | - | Detail |
| CX8g053625 | 8:2,543,965-2,545,627 | + | C1H8g29295 | C2H8g14140 | LOC_Os08g06010 | Os08g0156600 | - | Detail |
| CX8g050562 | 8:2,547,084-2,551,036 | - | C1H8g08476 | C2H8g15589 | LOC_Os08g06020 | Os08g0156700 | - | Detail |
| CX8g054756 | 8:2,551,543-2,551,986 | - | - | - | - | - | - | Detail |
| CX8g052400 | 8:2,554,443-2,556,885 | + | C1H8g02092 | C2H8g21917 | LOC_Os08g06040 | Os08g0156800 | - | Detail |
| CX8g054324 | 8:2,561,991-2,564,751 | - | C1H8g15605 | C2H8g24334 | LOC_Os08g06050 | Os08g0156900 | - | Detail |
| CX8g051380 | 8:2,565,261-2,566,127 | + | - | C2H8g13128 | - | - | - | Detail |
| CX8g054175 | 8:2,568,237-2,570,790 | + | C1H8g28625 | C2H8g05299 | LOC_Os08g06060 | Os08g0157000 | MAPK2 | Detail |
| CX8g054263 | 8:2,574,124-2,579,294 | - | C1H8g27521 | C2H8g16739 | LOC_Os08g06070 | Os08g0157100 | - | Detail |
| CX8g053806 | 8:2,593,188-2,593,712 | - | C1H8g10962 | C2H8g23133 | LOC_Os08g06090 | Os08g0157400 | - | Detail |
| CX8g052312 | 8:2,605,725-2,608,565 | - | C1H8g08300 | C2H8g02611 | LOC_Os08g06100 | Os08g0157500 | - | Detail |
| CX8g052450 | 8:2,638,035-2,644,589 | + | C1H8g18407 | C2H8g18338 | LOC_Os08g06110 | Os08g0157600 | - | Detail |
| CX8g053182 | 8:2,649,246-2,650,094 | + | - | C2H8g13172 | LOC_Os08g06120 | Os08g0157700 | - | Detail |