| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28114 | 9:127,927-128,471 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g14009 | 9:138,087-138,631 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g27378 | 9:148,248-148,792 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g01621 | 9:158,408-158,952 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g09939 | 9:168,569-169,113 | - | C2H9g05109 | - | - | - | - | Detail |
| C1H9g10841 | 9:222,155-222,469 | + | - | - | - | - | - | Detail |
| C1H9g20378 | 9:225,139-229,991 | - | C2H9g07486 | CX9g055204 | LOC_Os09g01140 | Os09g0100800 | OsGeBP11 | Detail |
| C1H9g29200 | 9:259,419-263,710 | - | C2H9g02141 | CX9g056163 | LOC_Os09g01290 | Os09g0101100 | - | Detail |
| C1H9g04128 | 9:301,326-311,063 | - | C2H9g15899 | CX9g055897 | LOC_Os09g01360 | Os09g0101800 | - | Detail |
| C1H9g17462 | 9:311,725-312,382 | - | C2H9g15899 | CX9g055897 | LOC_Os09g01360 | Os09g0101800 | - | Detail |
| C1H9g17478 | 9:331,713-332,598 | - | - | - | - | - | - | Detail |
| C1H9g27523 | 9:368,464-377,135 | + | C2H9g24411 | CX9g057870 | LOC_Os09g01590 | Os09g0103100 | - | Detail |
| C1H9g01741 | 9:380,162-385,109 | + | C2H9g22972 | CX9g057297 | LOC_Os09g01600 | Os09g0103200 | - | Detail |
| C1H9g12264 | 9:397,300-402,931 | + | C2H9g07969 | CX9g055170 | LOC_Os09g01620 | Os09g0103500 | - | Detail |
| C1H9g24389 | 9:405,379-412,173 | - | C2H9g23774 | CX9g055607 | LOC_Os09g01630 | Os09g0103600 | - | Detail |
| C1H9g06955 | 9:441,136-447,435 | + | C2H9g22729 | CX9g055907 | LOC_Os09g01650 | Os09g0103800 | - | Detail |
| C1H9g22354 | 9:471,216-474,715 | - | C2H9g16634 | CX9g057376 | LOC_Os09g01680 | Os09g0104200 | RAD51D, OsRAD51D.3, OsRAD51D, OsRad51D | Detail |
| C1H9g21586 | 9:474,785-477,542 | + | C2H9g14701 | - | LOC_Os09g01690 | Os09g0104300 | - | Detail |
| C1H9g13033 | 9:512,612-515,182 | - | C2H9g17453 | CX9g054917 | LOC_Os09g01790 | - | - | Detail |
| C1H9g05252 | 9:558,682-560,315 | + | C2H9g11873 | CX9g056345 | LOC_Os07g15420 | Os09g0499600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g054219 | 8:2,270,336-2,270,824 | - | C1H8g11107 | C2H8g18899 | LOC_Os08g05620 | Os08g0152400 | - | Detail |
| CX8g053111 | 8:2,273,057-2,273,296 | + | - | - | - | - | - | Detail |
| CX8g053022 | 8:2,275,563-2,277,113 | + | C1H8g11107 | C2H8g18899 | LOC_Os08g05620 | Os08g0152400 | - | Detail |
| CX8g050837 | 8:2,278,139-2,280,395 | - | C1H8g06937 | C2H8g24550 | LOC_Os08g05630 | Os08g0152500 | - | Detail |
| CX8g052907 | 8:2,282,614-2,283,666 | - | C1H8g20342 | C2H8g07504 | LOC_Os08g05640 | Os08g0152600 | - | Detail |
| CX8g051523 | 8:2,285,722-2,289,406 | + | C1H8g10991 | C2H8g02807 | LOC_Os08g05650 | Os08g0152700 | - | Detail |
| CX8g053390 | 8:2,290,681-2,294,431 | - | C1H8g07374 | C2H8g21822 | LOC_Os08g05660 | Os08g0152800 | - | Detail |
| CX8g051693 | 8:2,299,612-2,312,739 | - | C1H8g11597 | C2H8g19935 | LOC_Os08g05670 | Os08g0152900 | - | Detail |
| CX8g053061 | 8:2,318,376-2,324,297 | + | C1H8g25224 | C2H8g27253 | LOC_Os08g05690 | Os08g0153000 | - | Detail |
| CX8g052394 | 8:2,329,924-2,335,917 | + | C1H8g23270 | C2H8g06511 | LOC_Os08g05710 | Os08g0153000 | - | Detail |
| CX8g053744 | 8:2,337,918-2,338,667 | - | C1H8g19956 | - | LOC_Os08g05720 | Os08g0153300 | OsVTL3 | Detail |
| CX8g053750 | 8:2,343,259-2,348,756 | + | C1H8g19565 | C2H8g06197 | LOC_Os08g05750 | Os08g0153600 | - | Detail |
| CX8g053868 | 8:2,350,329-2,351,072 | - | C1H8g04224 | - | LOC_Os08g05770 | Os08g0153900 | - | Detail |
| CX8g052898 | 8:2,355,106-2,355,933 | - | C1H8g04224 | - | LOC_Os08g05780 | Os08g0153900 | - | Detail |
| CX8g053657 | 8:2,362,493-2,365,049 | + | C1H8g20355 | C2H8g27647 | LOC_Os08g05790 | Os08g0154000 | - | Detail |
| CX8g051919 | 8:2,369,156-2,371,939 | + | C1H8g29041 | C2H8g17806 | LOC_Os08g05800 | Os08g0260800 | - | Detail |
| CX8g051112 | 8:2,377,005-2,381,869 | - | C1H8g25949 | C2H8g21136 | LOC_Os08g05820 | Os08g0154250 | - | Detail |
| CX8g052139 | 8:2,385,701-2,389,134 | - | C1H8g29584 | C2H8g29354 | LOC_Os08g05830 | Os08g0154300 | - | Detail |
| CX8g051941 | 8:2,394,065-2,399,013 | + | C1H8g22679 | C2H8g09828 | LOC_Os08g05840 | Os08g0154600 | OsTOP1 | Detail |
| CX8g050524 | 8:2,401,578-2,404,306 | + | C1H8g19596 | C2H8g23368 | - | Os08g0154700 | - | Detail |