| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19126 | 4:28,482,932-28,483,633 | - | C1H4g06177 | CX4g036135 | LOC_Os04g55520 | Os04g0648900 | - | Detail |
| C2H4g07264 | 4:28,514,758-28,515,506 | + | C1H4g09680 | - | LOC_Os04g55560 | - | - | Detail |
| C2H4g14278 | 4:28,515,961-28,517,749 | + | C1H4g09680 | CX4g031647 | LOC_Os04g55560 | Os04g0649100 | SHAT1, AP2/EREBP#043, AP2/EREBP43 | Detail |
| C2H4g17474 | 4:28,522,715-28,529,752 | + | C1H4g00144 | CX4g035239 | LOC_Os04g55570 | Os04g0649200 | - | Detail |
| C2H4g02532 | 4:28,539,464-28,540,345 | - | C1H4g30735 | CX4g032527 | LOC_Os04g55590 | Os04g0649400 | WOX4, OsWOX4, Os WOX4 | Detail |
| C2H4g16594 | 4:28,545,758-28,546,096 | - | - | CX4g035485 | LOC_Os04g55600 | Os04g0649500 | - | Detail |
| C2H4g01325 | 4:28,552,020-28,552,618 | + | C1H4g22307 | - | - | - | - | Detail |
| C2H4g05985 | 4:28,552,135-28,552,428 | - | - | CX4g035117 | LOC_Os04g55610 | Os04g0649600 | - | Detail |
| C2H4g00524 | 4:28,554,014-28,557,592 | - | C1H4g26510 | CX4g031472 | LOC_Os04g55620 | Os04g0649700 | - | Detail |
| C2H4g24247 | 4:28,561,500-28,562,462 | + | C1H4g26377 | CX4g033189 | LOC_Os04g55640 | Os04g0649900 | - | Detail |
| C2H4g16213 | 4:28,567,208-28,567,720 | - | - | - | - | - | - | Detail |
| C2H4g10875 | 4:28,567,783-28,568,747 | + | C1H4g19253 | CX4g032778 | LOC_Os04g43030 | Os04g0509100 | - | Detail |
| C2H4g01573 | 4:28,569,522-28,573,198 | - | C1H4g30646 | CX4g032034 | LOC_Os04g55650 | Os04g0650000 | - | Detail |
| C2H4g09445 | 4:28,578,934-28,580,745 | - | C1H4g23223 | CX4g034578 | LOC_Os04g55660 | Os04g0650200 | - | Detail |
| C2H4g25070 | 4:28,582,467-28,585,780 | - | C1H4g17876 | CX4g035022 | LOC_Os04g55670 | Os04g0650300 | OsGT43I | Detail |
| C2H4g15264 | 4:28,590,936-28,592,348 | - | C1H4g16494 | CX4g036592 | LOC_Os04g55680 | Os04g0506000 | - | Detail |
| C2H4g30089 | 4:28,593,163-28,595,330 | + | C1H4g20767 | CX4g032417 | LOC_Os04g55690 | Os04g0650500 | - | Detail |
| C2H4g16279 | 4:28,595,912-28,598,901 | - | C1H4g29586 | CX4g034904 | LOC_Os04g55700 | Os04g0650600 | - | Detail |
| C2H4g25286 | 4:28,607,792-28,610,745 | + | C1H4g11243 | CX4g032420 | LOC_Os04g55710 | Os04g0650700 | - | Detail |
| C2H4g06390 | 4:28,613,676-28,616,566 | + | C1H4g03632 | CX4g033907 | LOC_Os04g55720 | Os04g0650800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g054831 | 8:1,888,600-1,888,857 | + | - | - | LOC_Os04g06290 | - | - | Detail |
| CX8g054517 | 8:1,893,918-1,896,907 | + | C1H8g02788 | C2H8g25816 | LOC_Os08g04770 | Os08g0143300 | - | Detail |
| CX8g054405 | 8:1,897,658-1,900,985 | - | C1H8g08432 | C2H8g13307 | LOC_Os08g04780 | Os08g0143400 | - | Detail |
| CX8g051991 | 8:1,901,676-1,904,689 | + | C1H8g31480 | C2H8g06325 | LOC_Os08g04790 | Os08g0143500 | - | Detail |
| CX8g054593 | 8:1,917,172-1,918,773 | + | C1H8g28636 | - | LOC_Os08g04800 | Os08g0143600 | - | Detail |
| CX8g054618 | 8:1,923,393-1,929,475 | - | C1H8g26183 | C2H8g06768 | LOC_Os08g04810 | Os08g0143700 | - | Detail |
| CX8g052032 | 8:1,931,965-1,932,192 | - | C1H8g21125 | C2H2g20108 | - | - | - | Detail |
| CX8g053411 | 8:1,939,679-1,942,311 | + | C1H8g02799 | C2H8g01481 | LOC_Os08g04840 | Os08g0144000 | - | Detail |
| CX8g053416 | 8:1,961,899-1,962,489 | + | C1H8g06963 | - | LOC_Os08g04890 | Os08g0144100 | - | Detail |
| CX8g054655 | 8:1,974,422-1,979,680 | - | C1H8g05048 | C2H8g26300 | LOC_Os08g05340 | Os08g0144400 | - | Detail |
| CX8g051690 | 8:1,984,615-1,990,021 | - | C1H8g10752 | C2H8g15072 | LOC_Os08g05340 | Os08g0144400 | - | Detail |
| CX8g050553 | 8:2,013,382-2,016,141 | + | C1H8g08902 | C2H8g22126 | LOC_Os08g05290 | Os08g0203100 | - | Detail |
| CX8g053074 | 8:2,025,170-2,025,322 | - | - | - | - | - | - | Detail |
| CX8g051560 | 8:2,052,949-2,057,353 | - | C1H8g11298 | C2H8g03207 | LOC_Os08g05280 | Os08g0148267 | - | Detail |
| CX8g052127 | 8:2,064,461-2,067,776 | + | C1H8g00005 | C2H8g24827 | LOC_Os08g05290 | Os08g0148300 | - | Detail |
| CX8g052488 | 8:2,069,605-2,069,778 | - | - | - | - | - | - | Detail |
| CX8g051911 | 8:2,074,583-2,077,445 | + | C1H8g21908 | C2H8g16693 | LOC_Os08g05410 | Os08g0149850 | - | Detail |
| CX8g054247 | 8:2,088,511-2,094,610 | - | C1H8g02096 | C2H8g30258 | LOC_Os08g05340 | Os08g0145600 | - | Detail |
| CX8g053275 | 8:2,096,304-2,097,685 | - | C1H8g04225 | C2H8g08399 | LOC_Os08g04920 | Os08g0149000 | - | Detail |
| CX8g053692 | 8:2,098,410-2,098,748 | + | - | - | - | - | - | Detail |