| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g28754 | 1:23,607,123-23,619,376 | - | C2H1g07801 | CX1g006661 | LOC_Os01g46510 | Os01g0653800 | - | Detail |
| C1H1g31351 | 1:23,646,597-23,647,101 | - | - | - | - | - | - | Detail |
| C1H1g31131 | 1:23,669,116-23,676,316 | + | C2H1g26396 | CX1g006750 | LOC_Os01g46570 | Os01g0654100 | - | Detail |
| C1H1g11738 | 1:23,677,773-23,682,848 | - | C2H1g01055 | CX1g002113 | LOC_Os01g46590 | Os01g0654200 | - | Detail |
| C1H1g07135 | 1:23,682,497-23,687,028 | + | C2H1g00478 | CX1g004232 | LOC_Os01g46580 | Os01g0654300 | - | Detail |
| C1H1g04619 | 1:23,687,981-23,692,257 | - | C2H1g09838 | CX1g002075 | LOC_Os01g46610 | Os01g0654500 | - | Detail |
| C1H1g23889 | 1:23,695,972-23,696,916 | - | C2H1g17869 | CX1g005644 | LOC_Os01g46620 | - | - | Detail |
| C1H1g01145 | 1:23,704,815-23,708,740 | + | C2H1g05914 | - | LOC_Os01g46650 | Os01g0654900 | - | Detail |
| C1H1g24345 | 1:23,738,182-23,745,576 | + | C2H1g00999 | CX1g000702 | LOC_Os01g46700 | Os01g0655300 | SDG705, OsSDG705 | Detail |
| C1H1g19947 | 1:23,748,198-23,754,176 | - | C2H1g28065 | CX1g003368 | LOC_Os01g46710 | Os01g0655400 | - | Detail |
| C1H1g28980 | 1:23,758,258-23,763,653 | + | C2H1g30387 | - | LOC_Os01g46720 | Os01g0655500 | - | Detail |
| C1H1g06509 | 1:23,774,585-23,782,512 | + | C2H1g10347 | CX1g005157 | LOC_Os01g46750 | Os01g0655800 | - | Detail |
| C1H1g10344 | 1:23,793,329-23,798,327 | + | C2H1g01219 | CX1g001306 | LOC_Os01g46760 | Os01g0656200 | OsPP2C8 | Detail |
| C1H1g15601 | 1:23,806,716-23,807,930 | - | C2H1g14070 | CX1g006460 | LOC_Os01g46800 | Os01g0656400 | - | Detail |
| C1H1g28624 | 1:23,820,920-23,827,657 | - | C2H1g24475 | CX1g005546 | LOC_Os01g46810 | Os01g0656600 | - | Detail |
| C1H1g31021 | 1:23,835,301-23,839,137 | + | C2H1g08798 | CX1g002002 | LOC_Os01g46840 | Os01g0656900 | - | Detail |
| C1H1g21539 | 1:23,840,054-23,842,127 | + | C2H1g22347 | CX1g004768 | LOC_Os01g46850 | Os01g0657000 | - | Detail |
| C1H1g07661 | 1:23,842,836-23,844,596 | - | C2H1g08096 | CX1g000538 | LOC_Os01g46860 | Os01g0657100 | PT11, OsPT11, PHT1-11, OsPht1;11, ORYsa;PHT1;11 | Detail |
| C1H1g13139 | 1:23,882,417-23,885,239 | - | C2H1g24228 | CX1g006603 | LOC_Os01g46926 | Os01g0658400 | UBC5A, OsUBC5a, OsUBC14, UBC14 | Detail |
| C1H1g10996 | 1:23,886,285-23,889,881 | - | C2H1g04871 | CX1g000846 | LOC_Os01g46932 | Os01g0658500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g051036 | 8:1,721,350-1,724,354 | - | C1H8g03438 | C2H8g06220 | LOC_Os08g04440 | Os08g0139000 | - | Detail |
| CX8g053718 | 8:1,727,265-1,728,850 | - | C1H8g15641 | C2H8g21692 | LOC_Os08g04450 | Os08g0139100 | OsMORF9 | Detail |
| CX8g050588 | 8:1,732,193-1,733,883 | - | C1H8g18260 | C2H8g21939 | LOC_Os08g04460 | Os08g0139200 | - | Detail |
| CX8g051905 | 8:1,745,916-1,747,010 | - | C1H8g17067 | C2H8g28996 | LOC_Os08g04470 | Os08g0110500 | PUB15, OsPUB15 | Detail |
| CX8g051739 | 8:1,752,466-1,755,745 | + | C1H8g25614 | C2H8g16693 | LOC_Os08g04490 | Os08g0149800 | - | Detail |
| CX8g051580 | 8:1,756,854-1,760,069 | - | C1H8g27402 | C2H8g02379 | LOC_Os08g04500 | Os08g0139700 | OsTPS3 | Detail |
| CX8g052260 | 8:1,765,625-1,765,792 | - | - | - | LOC_Os08g04520 | - | - | Detail |
| CX8g052775 | 8:1,781,320-1,782,864 | + | C1H8g15721 | - | LOC_Os08g04540 | Os08g0140300 | TDC1, OsTDC, TDC2 | Detail |
| CX8g054801 | 8:1,790,756-1,791,232 | - | C1H8g27148 | - | - | - | - | Detail |
| CX8g050533 | 8:1,796,081-1,797,655 | - | C1H8g04426 | - | LOC_Os08g04560 | Os08g0140500 | TDC3 | Detail |
| CX8g051150 | 8:1,808,106-1,809,497 | - | C1H8g15879 | C2H8g06408 | LOC_Os08g04570 | Os08g0140600 | - | Detail |
| CX8g052130 | 8:1,811,644-1,814,202 | - | C1H8g15879 | C2H8g06408 | LOC_Os08g04580 | Os08g0140700 | - | Detail |
| CX8g053331 | 8:1,815,739-1,819,923 | + | C1H8g12038 | C2H8g20133 | LOC_Os08g04590 | Os08g0141000 | - | Detail |
| CX8g050848 | 8:1,825,969-1,826,286 | - | - | - | - | - | - | Detail |
| CX8g050429 | 8:1,826,982-1,827,290 | - | - | - | - | - | - | Detail |
| CX8g051655 | 8:1,828,241-1,830,401 | + | C1H8g02855 | C2H8g05446 | LOC_Os08g04590 | Os08g0140700 | - | Detail |
| CX8g052617 | 8:1,837,179-1,837,370 | - | - | - | - | - | - | Detail |
| CX8g054144 | 8:1,840,539-1,842,710 | + | C1H8g22646 | C2H8g03239 | LOC_Os08g04620 | Os08g0141300 | OsVST1 | Detail |
| CX8g051133 | 8:1,844,946-1,849,509 | - | C1H8g14043 | C2H8g15761 | LOC_Os08g04630 | Os08g0141400 | - | Detail |
| CX8g051713 | 8:1,860,886-1,861,237 | + | C1H8g17138 | - | - | - | - | Detail |