| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g28211 | 3:29,218,817-29,222,059 | + | - | - | LOC_Os03g51340 | - | - | Detail |
| C1H3g12860 | 3:29,222,202-29,222,736 | + | - | - | - | - | - | Detail |
| C1H3g20524 | 3:29,225,331-29,225,960 | + | C2H3g13706 | CX3g026521 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C1H3g18325 | 3:29,227,752-29,228,597 | + | C2H3g16997 | CX3g025853 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C1H3g15265 | 3:29,238,857-29,242,067 | + | C2H3g11257 | CX3g028049 | LOC_Os03g55010 | Os03g0757200 | - | Detail |
| C1H3g28838 | 3:29,243,450-29,245,279 | + | C2H3g25803 | CX3g028049 | LOC_Os03g55020 | Os03g0757100 | - | Detail |
| C1H3g16314 | 3:29,245,467-29,246,990 | + | C2H3g12902 | CX3g028049 | LOC_Os03g55040 | Os03g0757500 | GSA1 | Detail |
| C1H3g22534 | 3:29,248,856-29,250,300 | + | C2H3g07075 | CX3g028049 | LOC_Os03g55050 | Os03g0757600 | - | Detail |
| C1H3g18474 | 3:29,265,338-29,266,780 | + | C2H3g15309 | CX3g031235 | LOC_Os03g55070 | Os03g0757900 | - | Detail |
| C1H3g02197 | 3:29,272,322-29,275,300 | - | C2H3g28463 | CX3g026009 | LOC_Os03g55080 | Os03g0758050 | - | Detail |
| C1H3g12323 | 3:29,280,290-29,287,456 | - | C2H3g07139 | CX3g028301 | LOC_Os03g55090 | Os03g0758100 | OsPho1 | Detail |
| C1H3g03734 | 3:29,290,583-29,295,880 | + | C2H3g19977 | CX3g028780 | LOC_Os03g55100 | Os03g0758300 | OsCNGC14 | Detail |
| C1H3g12190 | 3:29,308,896-29,311,909 | + | C2H3g18083 | CX3g025340 | LOC_Os03g55110 | Os03g0758400 | - | Detail |
| C1H3g12511 | 3:29,314,022-29,314,659 | - | C2H3g16234 | CX3g025542 | LOC_Os03g55120 | Os03g0758500 | - | Detail |
| C1H3g28552 | 3:29,329,376-29,336,032 | + | C2H3g10389 | CX3g030315 | LOC_Os03g55130 | Os03g0758600 | - | Detail |
| C1H3g29486 | 3:29,336,736-29,341,218 | + | C2H3g16550 | CX3g029765 | LOC_Os03g55140 | Os03g0758700 | - | Detail |
| C1H3g11985 | 3:29,343,238-29,345,484 | + | C2H3g15196 | CX3g027861 | LOC_Os03g55150 | Os03g0758800 | OseIF5A-2 | Detail |
| C1H3g25907 | 3:29,346,203-29,349,137 | + | C2H3g06066 | CX3g030192 | LOC_Os03g55164 | Os03g0758900 | - | Detail |
| C1H3g02522 | 3:29,350,447-29,351,082 | + | C2H3g18373 | CX3g030258 | LOC_Os03g55164 | Os03g0758950 | OsWRKY4 | Detail |
| C1H3g14505 | 3:29,351,141-29,353,889 | + | C2H3g20753 | CX3g030258 | LOC_Os03g55164 | Os03g0758950 | OsWRKY4 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX8g053748 | 8:630,373-635,536 | + | C1H8g24656 | C2H8g03645 | LOC_Os08g01930 | Os08g0110800 | - | Detail |
| CX8g054834 | 8:636,219-641,935 | - | C1H8g04195 | C2H8g11559 | LOC_Os08g01940 | Os08g0111200 | - | Detail |
| CX8g052771 | 8:652,212-656,644 | + | C1H8g12481 | C2H8g00315 | LOC_Os08g02050 | Os08g0112500 | - | Detail |
| CX8g054746 | 8:657,965-659,956 | + | C1H8g01502 | C2H8g29335 | LOC_Os08g02040 | Os08g0112400 | - | Detail |
| CX8g052218 | 8:662,342-663,751 | + | C1H8g26997 | C2H8g01856 | LOC_Os08g02030 | Os08g0112300 | - | Detail |
| CX8g051064 | 8:666,219-667,595 | + | C1H8g11962 | C2H8g18222 | LOC_Os08g02020 | Os08g0112300 | - | Detail |
| CX8g051100 | 8:670,849-672,246 | + | C1H8g13593 | C2H8g15787 | LOC_Os08g01980 | Os08g0111800 | - | Detail |
| CX8g054020 | 8:688,877-689,119 | + | - | C2H8g09827 | - | Os01g0184200 | - | Detail |
| CX8g053315 | 8:699,878-701,305 | + | C1H8g22372 | C2H8g14958 | LOC_Os08g01950 | Os08g0111300 | - | Detail |
| CX8g052941 | 8:712,319-714,962 | + | C1H8g05605 | C2H8g13642 | LOC_Os08g02060 | Os08g0112600 | - | Detail |
| CX8g053672 | 8:720,558-722,410 | + | C1H8g21312 | C2H8g22255 | LOC_Os08g02070 | Os08g0112700 | MADS26, OsMADS26, FDRMADS3, RMADS220 | Detail |
| CX8g052658 | 8:724,214-725,108 | - | C1H8g17084 | C2H8g26243 | LOC_Os08g02080 | Os08g0112800 | - | Detail |
| CX8g051088 | 8:729,579-732,001 | + | C1H8g29187 | C2H8g05019 | LOC_Os08g02094 | Os08g0112900 | - | Detail |
| CX8g050874 | 8:735,398-736,348 | + | C1H8g22779 | C2H8g30079 | LOC_Os08g02110 | Os08g0113000 | - | Detail |
| CX8g051694 | 8:740,616-742,973 | + | C1H8g30630 | C2H8g13104 | LOC_Os08g02120 | Os08g0113100 | - | Detail |
| CX8g052762 | 8:745,547-752,618 | - | C1H8g06086 | C2H8g16934 | LOC_Os08g02130 | Os08g0113200 | - | Detail |
| CX8g051904 | 8:754,482-758,647 | + | C1H8g26430 | C2H8g19662 | LOC_Os08g02140 | Os08g0113300 | - | Detail |
| CX8g054457 | 8:759,333-760,574 | - | - | - | LOC_Os08g02150 | Os08g0113400 | - | Detail |
| CX8g053630 | 8:770,205-772,858 | + | C1H8g05237 | C2H8g23828 | LOC_Os08g02160 | Os08g0115800 | NAC29, OsSWN2, OsSWN2L | Detail |
| CX8g051789 | 8:776,181-776,555 | - | - | - | LOC_Os08g02180 | Os08g0113700 | - | Detail |