| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g09327 | 9:13,875,100-13,879,319 | + | C1H9g31300 | - | LOC_Os09g27190 | Os09g0444100 | - | Detail |
| C2H9g09643 | 9:13,880,339-13,881,312 | + | C1H9g01379 | - | LOC_Os09g27190 | Os09g0444100 | - | Detail |
| C2H9g29764 | 9:13,882,563-13,883,261 | + | C1H9g01379 | - | LOC_Os09g27190 | Os09g0444100 | - | Detail |
| C2H9g16614 | 9:13,887,628-13,888,458 | + | C1H9g03322 | - | - | - | - | Detail |
| C2H9g09141 | 9:13,889,098-13,895,761 | - | C1H9g17916 | CX9g055460 | LOC_Os09g27210 | Os09g0444200 | - | Detail |
| C2H9g02894 | 9:13,900,760-13,906,113 | + | C1H9g09508 | CX9g057848 | LOC_Os09g27230 | Os09g0444500 | OsBRXL5 | Detail |
| C2H9g30118 | 9:13,908,696-13,912,600 | - | C1H9g07241 | CX9g055599 | LOC_Os09g27240 | Os09g0444700 | - | Detail |
| C2H9g28364 | 9:13,953,539-13,953,917 | - | C1H9g21040 | CX9g055484 | - | Os09g0446000 | - | Detail |
| C2H9g18491 | 9:13,961,614-13,964,547 | + | C1H9g31748 | CX9g057107 | LOC_Os09g27370 | Os09g0446200 | - | Detail |
| C2H9g27667 | 9:13,970,956-13,971,406 | - | C1H9g05710 | - | LOC_Os09g27400 | Os09g0446350 | - | Detail |
| C2H9g19872 | 9:13,975,397-13,979,614 | + | C1H9g06655 | CX9g055024 | LOC_Os09g27420 | Os09g0446800 | - | Detail |
| C2H9g27951 | 9:13,990,724-13,992,110 | - | C1H9g12096 | CX9g056835 | LOC_Os09g27450 | Os09g0447000 | - | Detail |
| C2H9g24846 | 9:14,009,868-14,012,588 | + | C1H9g25366 | CX9g055614 | LOC_Os09g27490 | - | - | Detail |
| C2H9g03009 | 9:14,017,302-14,019,718 | - | C1H9g31093 | CX9g057770 | LOC_Os09g27500 | Os09g0447300 | - | Detail |
| C2H9g15068 | 9:14,024,086-14,026,037 | - | C1H9g08652 | CX9g054878 | LOC_Os09g27510 | Os09g0447500 | - | Detail |
| C2H9g11232 | 9:14,030,857-14,033,106 | - | C1H9g00733 | CX9g057290 | LOC_Os09g27520 | Os09g0447600 | - | Detail |
| C2H9g00780 | 9:14,036,647-14,037,618 | - | C1H9g18103 | CX9g055092 | LOC_Os09g27570 | Os09g0448100 | - | Detail |
| C2H9g18939 | 9:14,042,420-14,047,560 | + | C1H9g10551 | CX9g055809 | LOC_Os09g27580 | Os09g0448200 | - | Detail |
| C2H9g17309 | 9:14,054,454-14,056,544 | + | C1H9g31490 | CX9g055972 | LOC_Os09g27590 | Os09g0448500 | GS9 | Detail |
| C2H9g13055 | 9:14,068,662-14,072,538 | + | C1H9g23054 | CX9g056032 | LOC_Os09g27610 | Os09g0448900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047015 | 7:24,622,840-24,623,820 | - | C1H7g12421 | C2H7g21126 | LOC_Os07g49360 | Os07g0694300 | - | Detail |
| CX7g048511 | 7:24,627,417-24,632,283 | - | C1H7g04846 | C2H7g11947 | LOC_Os07g49370 | Os07g0694400 | OsIRX9, OsGT43C, OsGT43C/OsIRX9 | Detail |
| CX7g048246 | 7:24,635,502-24,637,199 | + | C1H7g04330 | C2H7g21515 | LOC_Os07g49380 | Os07g0694500 | - | Detail |
| CX7g048998 | 7:24,639,446-24,641,930 | - | C1H7g06499 | C2H7g10645 | LOC_Os07g49390 | Os07g0694600 | PDT | Detail |
| CX7g047831 | 7:24,643,834-24,645,766 | - | C1H7g10754 | C2H7g29269 | LOC_Os07g49400 | Os07g0694700 | APX2, OsAPX2, APXb | Detail |
| CX7g048258 | 7:24,649,082-24,652,724 | - | C1H7g15269 | C2H7g08373 | LOC_Os07g49410 | Os07g0694800 | - | Detail |
| CX7g048455 | 7:24,661,576-24,672,564 | + | C1H7g06766 | C2H7g00903 | LOC_Os07g49460 | Os07g0695100 | - | Detail |
| CX7g048022 | 7:24,674,983-24,676,917 | + | C1H7g28034 | C2H7g12209 | LOC_Os07g49470 | Os07g0695300 | - | Detail |
| CX7g049781 | 7:24,678,045-24,681,695 | - | C1H7g26360 | C2H7g20370 | LOC_Os07g49480 | Os07g0695400 | - | Detail |
| CX7g047215 | 7:24,684,545-24,685,683 | + | C1H7g08926 | C2H7g29735 | LOC_Os07g49510 | Os07g0695700 | - | Detail |
| CX7g046226 | 7:24,688,551-24,693,808 | + | C1H7g03312 | C2H7g12536 | LOC_Os07g49520 | Os07g0695800 | - | Detail |
| CX7g046250 | 7:24,695,011-24,697,509 | + | C1H7g12414 | C2H7g18867 | LOC_Os07g49530 | Os07g0695900 | - | Detail |
| CX7g049544 | 7:24,714,187-24,716,794 | - | C1H7g26220 | - | - | - | - | Detail |
| CX8g054290 | 8:26,454-26,789 | - | - | - | - | - | - | Detail |
| CX8g050961 | 8:35,577-35,825 | + | - | - | - | Os08g0100150 | - | Detail |
| CX8g050610 | 8:37,261-40,484 | - | C1H8g12083 | C2H8g28927 | LOC_Os08g01030 | Os08g0100200 | OsZIP16 | Detail |
| CX8g053776 | 8:43,160-50,051 | - | C1H8g04317 | C2H8g18958 | LOC_Os08g01040 | Os08g0100400 | - | Detail |
| CX8g051154 | 8:53,051-60,084 | + | C1H8g23630 | C2H8g27088 | LOC_Os08g01054 | Os08g0100500 | - | Detail |
| CX8g052403 | 8:62,241-62,426 | + | - | - | - | - | - | Detail |
| CX8g054412 | 8:64,080-70,128 | + | C1H8g00303 | C2H8g04218 | - | Os08g0100600 | - | Detail |