| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g25799 | 3:21,855,969-21,861,944 | + | C1H3g24168 | CX3g026756 | LOC_Os03g42420 | Os03g0622100 | - | Detail |
| C2H3g07291 | 3:21,862,570-21,866,098 | - | C1H3g21229 | CX3g029697 | LOC_Os03g42480 | Os03g0622600 | - | Detail |
| C2H3g28170 | 3:21,880,963-21,881,323 | - | C1H3g08904 | CX3g029697 | LOC_Os03g42480 | Os03g0622600 | - | Detail |
| C2H3g03196 | 3:21,896,109-21,896,826 | + | C1H3g29338 | CX3g025485 | LOC_Os03g42520 | Os03g0623100 | - | Detail |
| C2H3g21699 | 3:21,932,897-21,942,713 | + | C1H3g27916 | CX3g030736 | LOC_Os03g42569 | Os03g0624000 | - | Detail |
| C2H3g15190 | 3:21,959,291-21,959,602 | + | - | CX3g028656 | LOC_Os03g42600 | Os03g0624300 | - | Detail |
| C2H3g25313 | 3:21,968,142-21,970,082 | + | C1H3g08494 | CX3g028370 | LOC_Os03g42630 | Os03g0624600 | - | Detail |
| C2H3g09083 | 3:21,973,891-21,979,239 | + | C1H3g16137 | CX3g027964 | LOC_Os03g42650 | Os03g0624800 | - | Detail |
| C2H3g11289 | 3:22,011,108-22,011,404 | - | - | - | - | - | - | Detail |
| C2H3g06917 | 3:22,025,621-22,036,771 | - | C1H3g14712 | CX3g025039 | LOC_Os03g42750 | Os03g0625700 | OsSEC3A | Detail |
| C2H3g21105 | 3:22,045,111-22,046,022 | - | - | - | - | - | - | Detail |
| C2H3g29064 | 3:22,048,009-22,051,280 | + | C1H3g07578 | CX3g029759 | LOC_Os03g42760 | Os03g0625800 | - | Detail |
| C2H3g01975 | 3:22,053,330-22,059,876 | - | C1H3g16517 | CX3g027078 | LOC_Os03g42770 | Os03g0625900 | - | Detail |
| C2H3g08723 | 3:22,068,602-22,070,031 | + | C1H3g21514 | CX3g029343 | LOC_Os03g42780 | Os03g0625933 | - | Detail |
| C2H3g20687 | 3:22,070,460-22,071,179 | + | C1H3g29387 | CX3g029343 | LOC_Os03g42780 | Os03g0626000 | - | Detail |
| C2H3g23218 | 3:22,073,567-22,075,960 | + | C1H3g27155 | CX3g030994 | LOC_Os03g42790 | Os03g0626100 | qGL3.5 | Detail |
| C2H3g18760 | 3:22,076,074-22,076,748 | + | C1H3g27155 | CX3g030994 | LOC_Os03g42790 | Os03g0626100 | qGL3.5 | Detail |
| C2H3g15721 | 3:22,089,314-22,091,201 | + | C1H3g08632 | CX3g030519 | LOC_Os03g42810 | Os03g0626500 | - | Detail |
| C2H3g07993 | 3:22,094,511-22,101,033 | + | C1H3g10295 | CX3g028719 | LOC_Os03g42820 | Os03g0626600 | - | Detail |
| C2H3g25529 | 3:22,109,745-22,112,331 | - | C1H3g04843 | CX3g025570 | LOC_Os03g42830 | Os03g0626700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048143 | 7:24,257,896-24,261,028 | + | C1H7g19015 | C2H7g19437 | LOC_Os07g48690 | Os07g0686500 | - | Detail |
| CX7g046198 | 7:24,265,154-24,265,801 | + | C1H7g12412 | - | LOC_Os07g48710 | Os07g0686600 | - | Detail |
| CX7g049468 | 7:24,267,499-24,271,007 | + | C1H7g15383 | C2H7g01734 | LOC_Os07g48720 | Os07g0686700 | - | Detail |
| CX7g050155 | 7:24,277,191-24,281,919 | + | C1H7g07622 | C2H7g24604 | LOC_Os07g48750 | Os07g0686900 | - | Detail |
| CX7g046159 | 7:24,284,821-24,287,747 | + | C1H7g15393 | C2H7g10362 | LOC_Os07g48760 | Os07g0687000 | CIPK03, OsCIPK03, CIPK3, OsCIPK3 | Detail |
| CX7g047295 | 7:24,289,158-24,291,222 | - | C1H7g28188 | C2H7g02535 | LOC_Os07g48770 | Os07g0687100 | - | Detail |
| CX7g047608 | 7:24,291,808-24,294,036 | - | C1H7g28188 | C2H7g02535 | LOC_Os07g48780 | Os07g0687200 | - | Detail |
| CX7g047899 | 7:24,296,150-24,298,468 | - | C1H7g20383 | C2H7g06868 | LOC_Os07g48790 | Os07g0687300 | - | Detail |
| CX7g048952 | 7:24,299,131-24,299,577 | - | C1H7g22393 | C2H7g17295 | LOC_Os07g48800 | Os07g0687400 | - | Detail |
| CX7g049363 | 7:24,303,454-24,303,684 | - | - | C2H10g24376 | - | - | - | Detail |
| CX7g046330 | 7:24,304,535-24,307,402 | + | C1H7g31166 | C2H7g09135 | LOC_Os07g48810 | Os07g0687500 | - | Detail |
| CX7g048006 | 7:24,310,300-24,311,883 | + | C1H7g02639 | C2H7g25085 | LOC_Os07g48820 | Os07g0687700 | - | Detail |
| CX7g050003 | 7:24,314,263-24,314,802 | + | C1H7g31752 | C2H7g15372 | LOC_Os07g49120 | Os07g0691600 | - | Detail |
| CX7g046082 | 7:24,319,852-24,320,930 | - | C1H7g22946 | C2H7g14572 | LOC_Os07g48830 | Os07g0687900 | OsGolS2, wsi76, WSI76, OsGolS1 | Detail |
| CX7g048207 | 7:24,325,842-24,326,804 | + | C1H7g14268 | - | LOC_Os07g48840 | Os07g0688000 | - | Detail |
| CX7g047140 | 7:24,329,623-24,331,620 | - | C1H7g10457 | C2H7g12731 | LOC_Os07g48850 | Os07g0688100 | FLO18 | Detail |
| CX7g048349 | 7:24,341,383-24,342,400 | + | C1H7g11562 | C2H7g29343 | LOC_Os07g48870 | Os07g0688200 | Os2R_MYB73 | Detail |
| CX7g046739 | 7:24,348,355-24,351,641 | - | C1H7g28040 | C2H7g06189 | LOC_Os07g48880 | Os07g0688300 | - | Detail |
| CX7g046902 | 7:24,352,998-24,356,797 | + | C1H7g03741 | C2H7g07644 | LOC_Os07g48890 | Os07g0688500 | - | Detail |
| CX7g046600 | 7:24,367,999-24,368,892 | - | C1H7g23157 | - | - | Os07g0688700 | - | Detail |