| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g26747 | 1:10,200,153-10,206,924 | - | C1H1g06389 | CX1g000991 | LOC_Os01g20160 | Os01g0307500 | SKC1, OsHKT1;5 | Detail |
| C2H1g25693 | 1:10,229,966-10,234,877 | - | C1H1g23404 | CX1g002251 | - | Os01g0307562 | - | Detail |
| C2H1g30004 | 1:10,238,711-10,240,379 | - | C1H1g16008 | CX1g001704 | LOC_Os01g20206 | Os01g0716500 | - | Detail |
| C2H1g16831 | 1:10,254,022-10,254,630 | - | - | CX1g004373 | - | - | - | Detail |
| C2H1g12164 | 1:10,309,362-10,310,343 | + | C1H1g09566 | CX1g001078 | LOC_Os01g20830 | Os01g0309800 | - | Detail |
| C2H1g25285 | 1:10,312,181-10,312,708 | - | C1H1g12067 | - | - | Os12g0238400 | - | Detail |
| C2H1g06659 | 1:10,317,954-10,321,711 | + | C1H1g13090 | CX1g001846 | LOC_Os01g20840 | Os01g0309900 | - | Detail |
| C2H1g26562 | 1:10,323,590-10,334,801 | - | C1H1g24589 | CX1g001918 | LOC_Os01g20860 | Os01g0310100 | - | Detail |
| C2H1g11171 | 1:10,357,037-10,357,636 | + | C1H1g15351 | CX1g005110 | LOC_Os01g20880 | Os01g0310500 | - | Detail |
| C2H1g17166 | 1:10,359,031-10,361,429 | + | C1H1g24151 | CX1g002504 | LOC_Os01g20880 | Os01g0310800 | - | Detail |
| C2H1g25968 | 1:10,369,411-10,370,224 | - | - | - | - | - | - | Detail |
| C2H1g04294 | 1:10,374,670-10,390,910 | + | C1H1g03706 | CX1g005596 | LOC_Os01g20940 | Os01g0311500 | - | Detail |
| C2H1g02829 | 1:10,395,448-10,396,164 | + | C1H1g01250 | CX1g000747 | LOC_Os01g20970 | Os01g0311700 | OsPMEI3 | Detail |
| C2H1g13458 | 1:10,397,195-10,399,672 | - | C1H1g26546 | CX1g006521 | LOC_Os01g20980 | Os01g0311800 | - | Detail |
| C2H1g09479 | 1:10,416,030-10,424,796 | + | C1H1g11820 | CX1g005083 | LOC_Os01g21034 | Os01g0312500 | PME42 | Detail |
| C2H1g04512 | 1:10,431,140-10,433,635 | + | C1H1g17184 | CX1g001330 | LOC_Os01g21070 | Os01g0312800 | - | Detail |
| C2H1g03011 | 1:10,450,177-10,451,235 | + | C1H1g08378 | CX1g006367 | LOC_Os01g21120 | Os01g0313300 | - | Detail |
| C2H1g01551 | 1:10,458,368-10,463,230 | - | C1H1g06744 | CX1g004973 | LOC_Os01g21144 | Os01g0314000 | - | Detail |
| C2H1g09093 | 1:10,463,966-10,468,875 | - | C1H1g26432 | CX1g005719 | LOC_Os01g21160 | Os01g0314100 | - | Detail |
| C2H1g08211 | 1:10,470,666-10,474,110 | + | C1H1g14129 | - | - | Os01g0540400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047275 | 7:24,063,616-24,067,897 | + | C1H7g11299 | C2H7g22068 | LOC_Os07g48430 | Os07g0682800 | OsAPY3, OsAPY, RTH1 | Detail |
| CX7g047537 | 7:24,070,648-24,070,857 | - | - | - | - | - | - | Detail |
| CX7g047935 | 7:24,094,570-24,096,220 | + | C1H7g23344 | C2H7g15907 | LOC_Os07g48450 | Os07g0683200 | OsNAC103 | Detail |
| CX7g047088 | 7:24,098,861-24,100,688 | + | C1H7g25988 | C2H7g07345 | LOC_Os07g48490 | Os07g0683900 | - | Detail |
| CX7g048600 | 7:24,108,707-24,110,110 | + | C1H7g25988 | C2H7g26142 | LOC_Os07g48460 | Os07g0683600 | OsEULD2 | Detail |
| CX7g046590 | 7:24,119,820-24,121,055 | - | C1H7g12898 | C2H7g28195 | LOC_Os07g48510 | Os07g0684100 | - | Detail |
| CX7g047739 | 7:24,135,546-24,136,635 | - | C1H7g14214 | C2H7g19082 | LOC_Os07g48550 | Os07g0684800 | - | Detail |
| CX7g049740 | 7:24,166,535-24,168,491 | + | C1H7g16982 | C2H7g21427 | LOC_Os07g48560 | Os07g0684900 | WOX11, OsWOX11, Os WOX11, OsWOX12A | Detail |
| CX7g050407 | 7:24,171,567-24,175,086 | - | C1H7g24592 | C2H7g27364 | LOC_Os07g48570 | Os07g0685000 | OsCDF3, RDD2 | Detail |
| CX7g046130 | 7:24,181,099-24,182,763 | - | C1H7g20266 | C2H7g00607 | LOC_Os07g48596 | Os07g0685300 | - | Detail |
| CX7g048563 | 7:24,185,808-24,198,160 | - | C1H7g00115 | C2H7g22371 | LOC_Os07g48602 | Os07g0685400 | - | Detail |
| CX7g049406 | 7:24,198,828-24,200,418 | + | C1H7g07276 | C2H7g15109 | LOC_Os07g48610 | Os07g0685500 | - | Detail |
| CX7g046344 | 7:24,203,195-24,203,503 | - | - | - | - | - | - | Detail |
| CX7g050266 | 7:24,212,440-24,214,182 | - | - | C2H7g23222 | LOC_Os07g48630 | Os07g0685700 | EIL2, OsEIL2 | Detail |
| CX7g049228 | 7:24,220,411-24,223,288 | + | C1H7g05652 | C2H7g06259 | LOC_Os07g48640 | Os07g0685800 | - | Detail |
| CX7g047810 | 7:24,223,805-24,231,729 | + | C1H7g29619 | C2H7g03520 | LOC_Os07g48650 | Os07g0685900 | - | Detail |
| CX7g048415 | 7:24,241,131-24,242,684 | + | C1H7g31573 | C2H7g23755 | LOC_Os07g48660 | Os07g0686100 | OsbZIP62 | Detail |
| CX7g049506 | 7:24,244,327-24,244,872 | - | C1H7g28364 | C2H7g19090 | LOC_Os07g48680 | Os07g0686300 | - | Detail |
| CX7g046580 | 7:24,247,447-24,248,074 | + | - | - | - | - | - | Detail |
| CX7g046233 | 7:24,250,973-24,256,405 | - | C1H7g30458 | C2H7g27862 | LOC_Os07g48700 | Os07g0686400 | - | Detail |