| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g00594 | 5:16,439,793-16,443,623 | + | C1H5g30717 | CX5g037280 | LOC_Os05g33270 | Os05g0401000 | - | Detail |
| C2H5g02233 | 5:16,444,064-16,445,342 | - | C1H5g03599 | CX5g037925 | LOC_Os05g33280 | Os05g0401100 | - | Detail |
| C2H5g05810 | 5:16,447,044-16,450,112 | - | C1H5g20391 | CX5g037189 | LOC_Os05g33290 | Os05g0401200 | - | Detail |
| C2H5g01039 | 5:16,451,669-16,454,855 | + | C1H5g07015 | CX5g037739 | LOC_Os05g33300 | Os05g0401300 | - | Detail |
| C2H5g30127 | 5:16,459,870-16,467,507 | - | C1H5g21820 | CX5g037619 | LOC_Os05g33310 | Os05g0401500 | OsALKBH10 | Detail |
| C2H5g11961 | 5:16,502,397-16,504,378 | - | C1H5g03038 | CX5g037920 | LOC_Os05g33360 | Os05g0402300 | - | Detail |
| C2H5g21496 | 5:16,520,610-16,522,707 | + | C1H5g27025 | CX5g039182 | LOC_Os05g33380 | Os05g0402700 | - | Detail |
| C2H5g25951 | 5:16,523,570-16,537,249 | - | C1H5g19618 | CX5g036855 | LOC_Os05g33390 | Os05g0402800 | OsPDR2 | Detail |
| C2H5g30164 | 5:16,548,987-16,550,300 | + | C1H5g25416 | CX5g038147 | LOC_Os05g33410 | Os05g0403000 | - | Detail |
| C2H5g12717 | 5:16,553,818-16,554,686 | + | C1H5g21075 | CX5g040383 | LOC_Os05g33400 | Os05g0402900 | - | Detail |
| C2H5g18668 | 5:16,558,772-16,560,027 | + | C1H5g08022 | CX5g040640 | - | Os05g0593000 | - | Detail |
| C2H5g01144 | 5:16,567,415-16,568,782 | + | C1H5g23859 | CX5g041059 | LOC_Os05g33430 | Os05g0403300 | - | Detail |
| C2H5g04560 | 5:16,586,516-16,588,969 | + | C1H5g02391 | CX5g039018 | LOC_Os05g33510 | Os05g0404200 | - | Detail |
| C2H5g10925 | 5:16,590,903-16,591,457 | - | C1H5g01796 | - | LOC_Os05g33514 | Os05g0404300 | - | Detail |
| C2H5g30675 | 5:16,591,936-16,594,263 | - | C1H5g29503 | CX5g038578 | LOC_Os05g33520 | Os05g0404400 | - | Detail |
| C2H5g08727 | 5:16,602,821-16,603,294 | - | C1H5g16117 | CX5g040559 | LOC_Os05g33550 | Os05g0404600 | - | Detail |
| C2H5g08228 | 5:16,605,651-16,606,803 | - | C1H5g14908 | CX5g040559 | LOC_Os05g33554 | Os05g0404700 | - | Detail |
| C2H5g25265 | 5:16,612,159-16,632,616 | - | C1H5g00960 | CX5g038938 | LOC_Os05g33570 | Os05g0405000 | OsPPDKB, cyOsPPDKB, cyOsPPDK, FLO4-4, FLO4 | Detail |
| C2H5g18538 | 5:16,636,306-16,636,662 | + | C1H5g24568 | - | LOC_Os05g33580 | Os05g0405400 | - | Detail |
| C2H5g01434 | 5:16,638,755-16,641,050 | - | C1H5g17267 | CX5g040594 | LOC_Os05g33590 | Os05g0405500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046000 | 7:23,896,430-23,901,006 | - | C1H7g19401 | C2H7g24344 | LOC_Os07g48229 | Os07g0680000 | OsVSR5 | Detail |
| CX7g048603 | 7:23,903,883-23,904,359 | - | C1H7g13190 | C2H7g23531 | LOC_Os07g48244 | Os07g0680300 | - | Detail |
| CX7g047556 | 7:23,908,786-23,910,729 | - | C1H7g01118 | C2H7g24468 | LOC_Os07g48260 | Os07g0680400 | WRKY47, OsWRKY47 | Detail |
| CX7g047252 | 7:23,912,741-23,924,290 | - | C1H7g04006 | C2H7g00831 | LOC_Os07g48270 | Os07g0680500 | OsCHR739, CHR739 | Detail |
| CX7g049761 | 7:23,927,006-23,929,040 | - | C1H7g12170 | C2H7g24446 | LOC_Os07g48280 | Os07g0680600 | - | Detail |
| CX7g047922 | 7:23,934,719-23,936,596 | + | C1H7g12984 | C2H7g11793 | LOC_Os07g48290 | Os07g0680900 | OsAGC14 | Detail |
| CX7g048000 | 7:23,937,863-23,940,166 | - | C1H7g30716 | C2H7g03954 | LOC_Os07g48300 | Os07g0681000 | - | Detail |
| CX7g047134 | 7:23,940,916-23,943,232 | - | C1H7g13736 | C2H7g19663 | LOC_Os07g48310 | Os07g0681100 | - | Detail |
| CX7g048737 | 7:23,949,242-23,949,538 | - | - | - | - | - | - | Detail |
| CX7g050203 | 7:23,957,142-23,958,829 | + | C1H7g20020 | C2H7g11337 | LOC_Os07g48320 | Os07g0681200 | - | Detail |
| CX7g048614 | 7:23,964,028-23,968,292 | + | C1H7g31370 | C2H7g09291 | LOC_Os07g48330 | Os07g0681300 | CYP714B1 | Detail |
| CX7g050350 | 7:23,991,952-23,999,359 | + | C1H7g13652 | C2H7g21440 | LOC_Os07g48350 | Os07g0681500 | - | Detail |
| CX7g048418 | 7:24,000,559-24,007,151 | + | C1H7g23608 | C2H7g14830 | LOC_Os07g48360 | Os07g0681600 | OsRecQ886 | Detail |
| CX7g049603 | 7:24,009,516-24,013,623 | + | C1H7g23117 | C2H7g29810 | LOC_Os07g48370 | Os07g0681700 | - | Detail |
| CX7g047173 | 7:24,015,885-24,016,376 | + | - | - | - | - | - | Detail |
| CX7g049645 | 7:24,021,676-24,022,765 | + | C1H7g27841 | C2H7g24286 | LOC_Os07g48390 | Os07g0682000 | OsHIPP9 | Detail |
| CX7g046293 | 7:24,029,986-24,032,747 | - | C1H7g24464 | C2H7g06356 | LOC_Os07g48410 | Os07g0682400 | - | Detail |
| CX7g047348 | 7:24,037,109-24,037,276 | - | - | - | - | - | - | Detail |
| CX7g047925 | 7:24,056,295-24,056,519 | + | - | - | - | - | - | Detail |
| CX7g049823 | 7:24,057,365-24,061,044 | - | C1H7g23378 | C2H7g20348 | LOC_Os07g48420 | Os07g0682700 | - | Detail |