| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g16481 | 5:18,611,537-18,619,827 | - | C2H5g23688 | CX5g040696 | LOC_Os05g38730 | Os05g0462600 | - | Detail |
| C1H5g01037 | 5:18,622,921-18,623,232 | - | C2H5g09767 | CX5g037421 | LOC_Os05g39050 | Os05g0462700 | - | Detail |
| C1H5g10476 | 5:18,626,978-18,627,268 | - | C2H5g30583 | CX5g040276 | LOC_Os05g38760 | Os05g0462900 | - | Detail |
| C1H5g21054 | 5:18,629,239-18,631,085 | - | C2H5g09732 | CX5g040728 | LOC_Os05g38770 | Os05g0463000 | - | Detail |
| C1H5g22054 | 5:18,637,478-18,639,855 | - | C2H5g02393 | CX5g041103 | LOC_Os05g38790 | Os05g0463300 | - | Detail |
| C1H5g20773 | 5:18,640,575-18,642,729 | + | C2H5g25319 | CX5g038806 | LOC_Os05g38800 | Os05g0463400 | - | Detail |
| C1H5g12108 | 5:18,645,302-18,650,615 | + | C2H5g01133 | CX5g039882 | LOC_Os05g38810 | Os05g0463500 | - | Detail |
| C1H5g15206 | 5:18,652,322-18,654,936 | - | C2H5g16713 | CX5g040078 | LOC_Os05g38820 | Os05g0463800 | HAP3B, OsHAP3B, OsNF-YB-3, NFYB3 | Detail |
| C1H5g26692 | 5:18,657,382-18,663,699 | - | C2H5g05069 | CX5g038352 | LOC_Os05g38830 | Os05g0463900 | - | Detail |
| C1H5g04043 | 5:18,667,859-18,672,129 | + | C2H5g10683 | CX5g038856 | LOC_Os05g38850 | Os05g0464100 | - | Detail |
| C1H5g03107 | 5:18,677,950-18,678,293 | - | C2H5g06217 | - | - | - | - | Detail |
| C1H5g03378 | 5:18,678,680-18,678,931 | - | C2H5g23544 | - | LOC_Os05g38860 | Os05g0464200 | - | Detail |
| C1H5g03501 | 5:18,683,783-18,690,116 | - | C2H5g00642 | CX5g040041 | LOC_Os05g38930 | Os05g0464300 | - | Detail |
| C1H5g22014 | 5:18,690,613-18,691,151 | - | - | - | - | - | - | Detail |
| C1H5g26266 | 5:18,701,358-18,701,600 | + | C2H5g07866 | CX5g037441 | LOC_Os05g38940 | Os05g0465000 | - | Detail |
| C1H5g29457 | 5:18,707,752-18,715,461 | - | C2H5g20572 | CX5g037912 | LOC_Os05g38950 | Os05g0465100 | - | Detail |
| C1H5g08488 | 5:18,726,667-18,727,444 | - | C2H5g24578 | CX5g039928 | LOC_Os05g38960 | Os05g0465400 | - | Detail |
| C1H5g21670 | 5:18,732,643-18,736,941 | + | C2H5g18626 | CX5g037984 | LOC_Os05g38980 | Os05g0465800 | - | Detail |
| C1H5g02280 | 5:18,743,614-18,744,776 | - | C2H5g30441 | CX5g037393 | LOC_Os05g38990 | Os05g0466100 | - | Detail |
| C1H5g22492 | 5:18,748,091-18,750,817 | - | C2H5g26967 | CX5g037000 | LOC_Os05g39000 | Os05g0466200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046459 | 7:23,593,292-23,594,707 | - | C1H7g20527 | C2H7g01608 | LOC_Os07g47550 | Os07g0672700 | - | Detail |
| CX7g046647 | 7:23,598,106-23,600,129 | + | C1H7g02928 | C2H7g13929 | LOC_Os07g47570 | Os07g0673000 | - | Detail |
| CX7g048976 | 7:23,601,048-23,603,193 | - | C1H7g01915 | C2H7g15514 | LOC_Os07g47580 | Os07g0673100 | - | Detail |
| CX7g047562 | 7:23,605,446-23,608,295 | - | C1H7g10304 | C2H7g20167 | LOC_Os07g47590 | Os07g0673200 | OsNLA1 | Detail |
| CX7g047198 | 7:23,613,663-23,614,064 | - | C1H7g09159 | C2H7g28733 | - | - | - | Detail |
| CX7g047207 | 7:23,616,604-23,617,271 | + | C1H7g00938 | C2H7g26067 | LOC_Os07g47620 | Os07g0673400 | - | Detail |
| CX7g046737 | 7:23,617,995-23,622,118 | - | C1H7g31315 | C2H7g09265 | LOC_Os07g47630 | Os07g0673500 | - | Detail |
| CX7g048496 | 7:23,622,729-23,623,079 | - | C1H7g28496 | - | LOC_Os07g47640 | Os07g0673550 | - | Detail |
| CX7g048588 | 7:23,624,394-23,625,530 | + | C1H7g16731 | C2H7g13226 | LOC_Os07g47650 | Os07g0673700 | - | Detail |
| CX7g050242 | 7:23,629,502-23,629,948 | - | - | - | LOC_Os07g47660 | Os07g0673801 | - | Detail |
| CX7g049451 | 7:23,633,518-23,634,067 | + | C1H7g20962 | C2H7g20394 | LOC_Os07g47670 | Os07g0673900 | HIGD2, OsHIGD2 | Detail |
| CX7g050112 | 7:23,638,622-23,639,053 | + | - | - | - | - | - | Detail |
| CX7g048566 | 7:23,642,672-23,645,764 | + | C1H7g06842 | C2H7g19852 | LOC_Os07g47700 | Os07g0674100 | OsUXS6 | Detail |
| CX7g046295 | 7:23,647,023-23,648,301 | + | C1H7g10802 | C2H7g01756 | LOC_Os07g47710 | Os07g0674200 | - | Detail |
| CX7g046238 | 7:23,649,359-23,651,572 | - | C1H7g03118 | C2H7g13384 | LOC_Os07g47720 | Os07g0674300 | - | Detail |
| CX7g048302 | 7:23,665,618-23,666,135 | + | C1H7g13115 | C2H7g08649 | LOC_Os07g47750 | Os07g0674400 | - | Detail |
| CX7g048276 | 7:23,667,962-23,668,641 | + | C1H7g31335 | C2H7g03388 | LOC_Os07g47760 | Os07g0674500 | - | Detail |
| CX7g049296 | 7:23,671,683-23,673,901 | + | C1H7g17874 | C2H7g11061 | LOC_Os07g47780 | Os07g0674700 | - | Detail |
| CX7g047836 | 7:23,674,964-23,675,711 | - | C1H7g19502 | C2H7g26596 | LOC_Os07g47790 | Os07g0674800 | ERF67, OsERF67 | Detail |
| CX7g046488 | 7:23,682,281-23,688,436 | + | C1H7g04950 | C2H7g23144 | LOC_Os07g47820 | Os07g0675000 | - | Detail |