| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g04719 | 3:30,048,261-30,049,679 | + | C2H3g00007 | CX3g026587 | LOC_Os03g56450 | Os03g0775900 | - | Detail |
| C1H3g16991 | 3:30,051,535-30,058,487 | + | C2H3g28249 | CX3g026064 | LOC_Os03g56460 | Os03g0776000 | - | Detail |
| C1H3g04454 | 3:30,058,885-30,060,862 | - | C2H3g15730 | CX3g028659 | LOC_Os03g56470 | Os03g0776100 | OsPERK4 | Detail |
| C1H3g02970 | 3:30,083,179-30,085,217 | + | C2H3g19254 | CX3g025698 | LOC_Os03g56540 | Os03g0776900 | - | Detail |
| C1H3g04407 | 3:30,097,126-30,098,904 | + | C2H3g09900 | CX3g029754 | LOC_Os03g56580 | Os03g0777000 | ONAC066 | Detail |
| C1H3g14095 | 3:30,100,606-30,103,597 | - | C2H3g20066 | CX3g026134 | LOC_Os03g56590 | Os03g0777100 | - | Detail |
| C1H3g29609 | 3:30,105,194-30,106,931 | - | C2H3g09685 | CX3g028274 | LOC_Os03g56610 | Os03g0777500 | - | Detail |
| C1H3g10794 | 3:30,109,421-30,112,114 | + | C2H3g13878 | CX3g026442 | LOC_Os03g56620 | Os03g0777600 | - | Detail |
| C1H3g30679 | 3:30,112,281-30,118,671 | - | C2H3g10928 | CX3g029819 | LOC_Os03g56630 | Os03g0777700 | - | Detail |
| C1H3g05671 | 3:30,124,647-30,132,351 | + | C2H3g07763 | CX3g031249 | LOC_Os03g56660 | Os03g0778000 | - | Detail |
| C1H3g25718 | 3:30,132,787-30,133,497 | - | - | CX3g031326 | LOC_Os03g56670 | Os03g0778100 | OsPS1-F | Detail |
| C1H3g14021 | 3:30,193,021-30,193,974 | - | C2H3g24740 | CX3g030337 | LOC_Os03g56770 | Os03g0779800 | - | Detail |
| C1H3g21633 | 3:30,206,264-30,207,187 | - | C2H3g24740 | CX3g030337 | LOC_Os03g56710 | Os03g0779000 | - | Detail |
| C1H3g29791 | 3:30,221,742-30,226,820 | - | - | CX3g025944 | - | Os03g0748750 | - | Detail |
| C1H3g06826 | 3:30,237,076-30,237,720 | - | C2H3g24740 | CX3g030337 | LOC_Os03g56770 | Os03g0779800 | - | Detail |
| C1H3g23563 | 3:30,250,569-30,253,537 | - | C2H3g20617 | CX3g025581 | LOC_Os03g56790 | Os03g0780400 | OsADF2 | Detail |
| C1H3g23600 | 3:30,255,611-30,260,618 | + | C2H3g18001 | CX3g026219 | LOC_Os03g56800 | Os03g0780500 | - | Detail |
| C1H3g17595 | 3:30,261,445-30,264,457 | + | C2H3g14864 | CX3g030860 | LOC_Os03g56810 | Os03g0780600 | - | Detail |
| C1H3g26439 | 3:30,266,481-30,267,866 | + | C2H3g16433 | CX3g026170 | LOC_Os03g56820 | Os03g0780800 | - | Detail |
| C1H3g14922 | 3:30,269,354-30,271,880 | - | C2H3g03306 | CX3g028624 | LOC_Os03g56830 | Os03g0780900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046926 | 7:23,435,633-23,438,744 | + | C1H7g05472 | C2H7g28056 | LOC_Os07g47300 | Os07g0669200 | OsObgC1 | Detail |
| CX7g049392 | 7:23,447,164-23,448,120 | - | C1H7g18440 | C2H7g21286 | LOC_Os07g47330 | Os07g0669500 | FZP, SGDP7, BFL1, COS1, qSrn7/FZP, qSrn7 | Detail |
| CX7g048029 | 7:23,455,603-23,459,020 | - | C1H7g18929 | C2H7g27264 | LOC_Os07g47340 | Os07g0669600 | - | Detail |
| CX7g047776 | 7:23,460,027-23,465,057 | - | C1H7g12718 | C2H7g12746 | LOC_Os07g47350 | Os07g0669700 | OsHAK7 | Detail |
| CX7g049571 | 7:23,471,560-23,480,044 | + | C1H7g08006 | C2H7g11692 | LOC_Os07g47360 | Os07g0669800 | WG7 | Detail |
| CX7g048823 | 7:23,481,922-23,484,102 | - | C1H7g06471 | C2H7g15594 | LOC_Os07g47370 | Os07g0670000 | - | Detail |
| CX7g047344 | 7:23,486,713-23,487,405 | + | C1H7g30296 | C2H7g12765 | LOC_Os07g47390 | Os07g0670200 | - | Detail |
| CX7g047249 | 7:23,491,198-23,492,139 | + | C1H7g30296 | C2H7g12765 | LOC_Os07g47400 | Os07g0670300 | - | Detail |
| CX7g046896 | 7:23,493,612-23,496,848 | + | - | - | LOC_Os07g47410 | - | - | Detail |
| CX7g047080 | 7:23,499,439-23,500,005 | + | C1H7g08125 | - | LOC_Os07g47420 | Os07g0670600 | - | Detail |
| CX7g050025 | 7:23,514,159-23,514,434 | + | C1H7g22361 | - | LOC_Os07g47450 | Os07g0671000 | ACL1 | Detail |
| CX7g048175 | 7:23,518,445-23,525,249 | - | C1H7g21503 | C2H7g07787 | LOC_Os07g46140 | - | - | Detail |
| CX7g049257 | 7:23,529,187-23,530,827 | - | C1H7g14012 | C2H7g12731 | LOC_Os07g47470 | Os07g0671200 | - | Detail |
| CX7g048772 | 7:23,539,204-23,540,416 | + | C1H7g13388 | C2H7g07510 | LOC_Os07g47480 | Os07g0671400 | - | Detail |
| CX7g049897 | 7:23,549,657-23,554,197 | - | C1H7g12741 | C2H7g07667 | LOC_Os07g47490 | Os07g0671500 | - | Detail |
| CX7g049044 | 7:23,560,072-23,566,482 | + | C1H7g13245 | C2H7g15307 | LOC_Os07g47500 | Os07g0671700 | OsPRMT4 | Detail |
| CX7g048974 | 7:23,568,248-23,570,035 | + | C1H7g12389 | C2H7g02689 | LOC_Os07g47510 | Os07g0671800 | - | Detail |
| CX7g047606 | 7:23,572,518-23,572,891 | + | - | C2H7g15475 | - | Os07g0672175 | - | Detail |
| CX7g050215 | 7:23,578,488-23,588,545 | + | C1H7g00362 | C2H7g00068 | LOC_Os07g47530 | Os07g0672500 | - | Detail |
| CX7g049131 | 7:23,589,692-23,590,739 | - | C1H7g07897 | C2H7g23672 | LOC_Os07g47540 | Os07g0672600 | - | Detail |