| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g01031 | 9:14,259,818-14,260,375 | + | C2H9g21780 | CX9g058122 | LOC_Os09g24580 | Os09g0458700 | - | Detail |
| C1H9g23501 | 9:14,265,410-14,265,727 | + | - | CX9g055880 | LOC_Os09g28500 | Os09g0458800 | - | Detail |
| C1H9g27925 | 9:14,271,724-14,272,020 | + | - | CX9g057359 | LOC_Os09g28510 | Os09g0458900 | - | Detail |
| C1H9g30078 | 9:14,284,614-14,285,425 | + | C2H9g06834 | CX8g053749 | LOC_Os09g28520 | Os09g0459200 | SG1, OsSG1 | Detail |
| C1H9g30501 | 9:14,295,803-14,296,597 | - | C2H8g24284 | CX8g053292 | LOC_Os09g28550 | Os09g0459500 | - | Detail |
| C1H9g01784 | 9:14,303,871-14,308,362 | - | C2H9g17751 | CX9g056105 | LOC_Os09g28560 | Os09g0459600 | - | Detail |
| C1H9g28087 | 9:14,312,318-14,324,249 | + | C2H9g06752 | CX9g057640 | LOC_Os09g28570 | Os09g0459800 | - | Detail |
| C1H9g30852 | 9:14,324,374-14,328,346 | - | C2H9g25937 | CX9g055374 | - | - | - | Detail |
| C1H9g27185 | 9:14,325,372-14,325,692 | + | - | CX9g057488 | - | - | - | Detail |
| C1H9g15128 | 9:14,328,593-14,328,877 | - | C2H9g25937 | CX9g055374 | - | Os09g0459900 | - | Detail |
| C1H9g10045 | 9:14,336,621-14,337,228 | + | C2H8g25958 | CX9g055458 | LOC_Os09g28590 | Os09g0460000 | - | Detail |
| C1H9g20930 | 9:14,339,731-14,340,594 | + | C2H9g01353 | CX9g056394 | LOC_Os09g28600 | Os09g0460100 | - | Detail |
| C1H9g17836 | 9:14,348,465-14,358,314 | + | C2H9g17816 | CX9g055971 | LOC_Os09g28610 | Os09g0460200 | - | Detail |
| C1H9g22594 | 9:14,360,279-14,361,229 | + | C2H9g26252 | CX9g055449 | LOC_Os09g28630 | Os09g0460400 | - | Detail |
| C1H9g11334 | 9:14,362,419-14,363,357 | + | C2H9g21518 | CX9g055140 | LOC_Os09g28640 | Os09g0460500 | - | Detail |
| C1H9g08722 | 9:14,365,300-14,366,238 | + | C2H9g26252 | CX9g055140 | LOC_Os09g28650 | Os09g0460700 | - | Detail |
| C1H9g30916 | 9:14,375,244-14,376,290 | - | C2H9g05249 | CX9g055140 | LOC_Os09g28690 | Os09g0461500 | - | Detail |
| C1H9g06910 | 9:14,383,253-14,384,218 | + | C2H9g26252 | CX9g055140 | LOC_Os09g28720 | Os09g0461700 | - | Detail |
| C1H9g01019 | 9:14,385,140-14,386,243 | - | C2H9g05249 | CX9g055449 | LOC_Os09g28730 | Os09g0461900 | - | Detail |
| C1H9g16558 | 9:14,392,883-14,394,025 | + | C2H9g05249 | CX9g055140 | LOC_Os09g28740 | Os09g0462100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047591 | 7:23,287,818-23,288,629 | + | C1H7g26127 | - | LOC_Os07g47070 | Os07g0666300 | - | Detail |
| CX7g047573 | 7:23,297,440-23,298,728 | - | C1H7g11517 | C2H7g00734 | LOC_Os07g47090 | Os07g0666600 | - | Detail |
| CX7g048020 | 7:23,313,416-23,313,589 | + | - | - | - | Os02g0188201 | - | Detail |
| CX7g047326 | 7:23,317,491-23,321,614 | + | C1H7g10629 | C2H7g15912 | LOC_Os07g47100 | Os07g0666900 | - | Detail |
| CX7g047921 | 7:23,326,774-23,329,422 | + | C1H7g03960 | C2H7g25231 | LOC_Os07g47110 | Os07g0667000 | - | Detail |
| CX7g046255 | 7:23,331,966-23,333,718 | - | C1H7g12132 | C2H7g16605 | LOC_Os07g47120 | Os07g0667100 | - | Detail |
| CX7g047807 | 7:23,335,480-23,337,979 | - | C1H7g02285 | C2H7g00650 | LOC_Os07g47140 | Os07g0667300 | OsCOL13, OsBBX23, OsCCT27, OsR | Detail |
| CX7g049039 | 7:23,342,527-23,343,753 | - | C1H7g30657 | C2H7g23927 | LOC_Os07g47150 | Os07g0667400 | - | Detail |
| CX7g048139 | 7:23,359,977-23,363,914 | + | C1H7g14255 | C2H7g02172 | LOC_Os07g47180 | Os07g0668000 | - | Detail |
| CX7g049355 | 7:23,364,428-23,367,530 | - | C1H7g03852 | C2H7g30200 | LOC_Os07g47194 | Os07g0668100 | - | Detail |
| CX7g046989 | 7:23,368,908-23,373,866 | - | C1H7g29469 | C2H7g07637 | LOC_Os07g47201 | Os07g0668200 | - | Detail |
| CX7g046154 | 7:23,374,691-23,376,659 | - | C1H7g10049 | C2H7g18313 | LOC_Os07g47210 | Os07g0668300 | - | Detail |
| CX7g047736 | 7:23,380,536-23,383,367 | + | C1H7g05603 | C2H7g24430 | LOC_Os07g47230 | Os07g0668500 | Gnk2RLK-6 | Detail |
| CX7g046144 | 7:23,385,038-23,385,760 | - | - | C2H7g17835 | LOC_Os07g47240 | Os07g0668600 | OsGZF1 | Detail |
| CX7g049272 | 7:23,399,171-23,399,434 | + | - | - | - | - | - | Detail |
| CX7g048230 | 7:23,400,816-23,405,392 | + | C1H7g28673 | C2H7g19626 | LOC_Os07g47250 | Os07g0668700 | - | Detail |
| CX7g046728 | 7:23,406,451-23,407,767 | + | C1H7g06324 | C2H7g07768 | LOC_Os07g47260 | Os07g0668800 | - | Detail |
| CX7g049796 | 7:23,409,537-23,412,409 | - | C1H7g26035 | C2H7g01712 | LOC_Os07g47270 | Os07g0668900 | - | Detail |
| CX7g047789 | 7:23,416,856-23,430,441 | + | C1H7g17349 | C2H7g22064 | LOC_Os07g47284 | Os07g0669000 | - | Detail |
| CX7g045985 | 7:23,430,665-23,434,576 | - | C1H7g19445 | C2H7g10278 | LOC_Os07g47290 | Os07g0669100 | - | Detail |