| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g03783 | 7:3,780,217-3,783,465 | - | C2H7g16319 | CX7g046571 | LOC_Os07g08430 | Os07g0182100 | - | Detail |
| C1H7g22816 | 7:3,789,335-3,792,475 | + | C2H7g13219 | CX7g046025 | LOC_Os07g08440 | Os07g0182200 | - | Detail |
| C1H7g08147 | 7:3,807,676-3,808,974 | - | C2H7g21054 | CX7g048026 | LOC_Os07g08460 | Os07g0182400 | - | Detail |
| C1H7g08163 | 7:3,832,487-3,833,275 | - | C2H7g27628 | CX7g049402 | - | Os07g0182601 | - | Detail |
| C1H7g17559 | 7:3,840,379-3,847,180 | + | C2H7g01878 | CX7g047392 | LOC_Os07g08500 | Os07g0182900 | MET1B, OsMET1b | Detail |
| C1H7g01208 | 7:3,883,980-3,887,626 | - | C2H7g05997 | CX7g049817 | LOC_Os07g08520 | Os07g0183100 | - | Detail |
| C1H7g01935 | 7:3,888,270-3,889,742 | + | C2H7g13555 | CX7g047842 | LOC_Os07g08530 | Os07g0183200 | - | Detail |
| C1H7g03119 | 7:3,909,043-3,910,595 | - | C2H7g11185 | CX7g049244 | LOC_Os07g08660 | Os03g0798600 | - | Detail |
| C1H7g16015 | 7:3,918,959-3,920,511 | + | C2H7g06349 | CX7g047415 | LOC_Os07g08710 | Os07g0184800 | OsATH1 | Detail |
| C1H7g09330 | 7:3,921,171-3,929,205 | + | C2H7g15936 | CX7g046514 | LOC_Os07g08729 | Os07g0184900 | - | Detail |
| C1H7g00026 | 7:3,931,908-3,934,880 | - | C2H7g05786 | CX7g048929 | LOC_Os07g08750 | Os07g0185000 | - | Detail |
| C1H7g02270 | 7:3,936,833-3,941,172 | - | C2H7g20869 | CX7g050270 | LOC_Os07g08760 | Os07g0185200 | - | Detail |
| C1H7g21233 | 7:3,960,432-3,966,423 | + | C2H7g09570 | CX7g050362 | LOC_Os07g08790 | Os07g0185432 | - | Detail |
| C1H7g04399 | 7:3,974,316-3,981,839 | + | C2H7g02745 | CX7g049699 | LOC_Os07g08810 | Os07g0185700 | - | Detail |
| C1H7g17793 | 7:3,985,947-3,989,076 | + | C2H7g29336 | CX7g048108 | LOC_Os07g08820 | Os07g0185800 | - | Detail |
| C1H7g13541 | 7:3,997,534-3,997,770 | - | C2H7g13139 | CX3g028966 | - | Os07g0185900 | - | Detail |
| C1H7g15110 | 7:4,004,800-4,006,586 | - | C2H7g30045 | CX7g047579 | LOC_Os07g08840 | Os07g0186000 | TRXH, trxh, Trx-H, OsTRXh1, OsTrxh1, Os1, OsTrx23, RPP13-1 | Detail |
| C1H7g31770 | 7:4,031,391-4,036,599 | + | C2H7g00916 | CX7g047241 | LOC_Os07g08880 | Os07g0186400 | OsSHL1 | Detail |
| C1H7g06257 | 7:4,038,943-4,041,663 | + | C2H7g24863 | CX7g047241 | LOC_Os07g08890 | Os07g0186500 | - | Detail |
| C1H7g14544 | 7:4,044,365-4,050,529 | + | C2H7g24828 | CX7g047294 | LOC_Os07g08950 | Os07g0187200 | OsD-LDH2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002578 | 1:27,684,468-27,685,502 | - | C1H1g31440 | C2H1g01556 | LOC_Os01g53910 | Os01g0742300 | - | Detail |
| CX1g002620 | 1:27,697,072-27,697,557 | - | C1H6g04386 | C2H6g28732 | - | - | - | Detail |
| CX1g007266 | 1:27,699,682-27,703,078 | + | C1H1g30211 | C2H1g04401 | LOC_Os01g53920 | Os01g0742400 | OsASLRK | Detail |
| CX1g000337 | 1:27,703,727-27,707,420 | - | C1H1g16829 | C2H1g05690 | LOC_Os01g53930 | Os01g0742500 | OsHXK6 | Detail |
| CX1g005919 | 1:27,709,571-27,709,925 | - | C1H1g31036 | C2H1g15551 | LOC_Os01g53940 | Os01g0742766 | - | Detail |
| CX1g007218 | 1:27,725,155-27,727,266 | + | C1H1g12146 | C2H1g26459 | LOC_Os01g53980 | Os01g0743100 | - | Detail |
| CX1g003238 | 1:27,733,528-27,736,184 | - | C1H1g13979 | C2H1g30365 | LOC_Os01g53990 | Os01g0743200 | - | Detail |
| CX1g000051 | 1:27,742,704-27,742,853 | - | - | - | - | - | - | Detail |
| CX1g000573 | 1:27,743,543-27,747,659 | + | C1H1g20416 | C2H1g07295 | LOC_Os01g54010 | Os01g0743300 | - | Detail |
| CX1g001592 | 1:27,748,379-27,754,106 | - | C1H1g03969 | C2H1g18249 | LOC_Os01g54020 | Os01g0743400 | - | Detail |
| CX1g003460 | 1:27,754,348-27,758,985 | + | C1H1g00803 | C2H1g05014 | LOC_Os01g54030 | Os01g0743500 | OscytME3 | Detail |
| CX1g004169 | 1:27,760,086-27,764,194 | - | C1H1g06840 | C2H1g00803 | LOC_Os01g54040 | Os01g0743600 | - | Detail |
| CX1g001390 | 1:27,770,343-27,771,534 | + | C1H1g16391 | C2H1g15454 | LOC_Os01g54050 | Os01g0743800 | - | Detail |
| CX1g003627 | 1:27,776,522-27,783,619 | + | C1H1g28688 | C2H1g21661 | LOC_Os01g54080 | Os01g0744000 | - | Detail |
| CX1g006644 | 1:27,784,873-27,786,552 | + | C1H1g31382 | C2H1g24378 | LOC_Os01g54090 | Os01g0744200 | - | Detail |
| CX1g000737 | 1:27,788,159-27,792,628 | - | C1H1g10444 | C2H1g18426 | LOC_Os01g54100 | Os01g0744300 | - | Detail |
| CX1g000548 | 1:27,796,888-27,797,142 | - | - | - | - | - | - | Detail |
| CX1g000340 | 1:27,797,356-27,798,956 | + | C1H1g12791 | C2H1g05632 | LOC_Os06g31220 | Os01g0643800 | - | Detail |
| CX1g000671 | 1:27,804,642-27,811,187 | - | C1H1g08595 | C2H1g18422 | LOC_Os01g54119 | Os01g0744400 | - | Detail |
| CX1g004050 | 1:27,815,275-27,815,784 | - | C1H1g04241 | C2H1g03794 | LOC_Os01g54140 | Os01g0744700 | - | Detail |