| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g01183 | 7:3,083,384-3,085,623 | + | C2H7g29026 | CX7g049710 | - | - | - | Detail |
| C1H7g23721 | 7:3,092,475-3,095,262 | + | C2H7g16909 | CX7g049551 | - | - | - | Detail |
| C1H7g05391 | 7:3,109,783-3,111,891 | - | C2H7g04812 | CX7g049569 | LOC_Os07g06930 | Os07g0166500 | - | Detail |
| C1H7g22643 | 7:3,120,933-3,126,269 | + | C2H7g21113 | CX7g050299 | LOC_Os07g07230 | Os07g0166700 | - | Detail |
| C1H7g20925 | 7:3,126,917-3,131,402 | - | C2H7g24489 | CX7g046894 | LOC_Os07g07240 | Os07g0166800 | - | Detail |
| C1H7g28784 | 7:3,133,411-3,137,261 | + | C2H7g08428 | CX7g046720 | LOC_Os07g07250 | Os07g0167000 | - | Detail |
| C1H7g30457 | 7:3,138,623-3,148,456 | + | C2H7g21719 | CX7g047112 | LOC_Os07g07260 | Os07g0167100 | - | Detail |
| C1H7g24882 | 7:3,148,672-3,152,109 | - | C2H7g21242 | CX7g050218 | LOC_Os07g07270 | Os07g0167200 | - | Detail |
| C1H7g19293 | 7:3,153,980-3,155,021 | + | C2H7g17486 | CX7g046909 | LOC_Os07g07280 | Os07g0167300 | - | Detail |
| C1H7g09549 | 7:3,170,163-3,181,502 | - | C2H7g26058 | CX7g046534 | LOC_Os07g07310 | Os07g0168000 | - | Detail |
| C1H7g13022 | 7:3,192,775-3,196,132 | + | C2H7g07731 | CX7g050193 | LOC_Os07g07340 | Os07g0168600 | - | Detail |
| C1H7g31137 | 7:3,200,262-3,200,747 | - | C2H7g07319 | CX7g046780 | LOC_Os07g07350 | Os07g0168800 | ZFP177 | Detail |
| C1H7g11934 | 7:3,201,883-3,202,508 | - | - | - | - | - | - | Detail |
| C1H7g17268 | 7:3,207,054-3,207,542 | - | C2H7g20995 | CX7g047999 | LOC_Os07g07400 | Os07g0169500 | - | Detail |
| C1H7g28232 | 7:3,211,802-3,213,697 | + | C2H7g14770 | CX7g046317 | LOC_Os07g07410 | Os07g0169600 | - | Detail |
| C1H7g27542 | 7:3,214,498-3,217,039 | + | C2H7g13120 | CX7g046653 | LOC_Os07g07420 | Os07g0169700 | GA20OX3, OsGA20ox3, ga20ox3 | Detail |
| C1H7g28416 | 7:3,219,026-3,220,123 | - | C2H7g17670 | CX7g048611 | LOC_Os07g07430 | Os07g0169800 | - | Detail |
| C1H7g01686 | 7:3,222,818-3,223,597 | + | C2H7g21046 | CX7g048338 | LOC_Os07g07440 | Os07g0170000 | - | Detail |
| C1H7g19349 | 7:3,223,939-3,224,745 | - | C2H7g13629 | CX7g049509 | LOC_Os07g07450 | Os07g0561500 | - | Detail |
| C1H7g26848 | 7:3,227,754-3,230,753 | - | C2H7g25973 | CX7g047710 | LOC_Os07g07470 | Os07g0170100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002578 | 1:27,684,468-27,685,502 | - | C1H1g31440 | C2H1g01556 | LOC_Os01g53910 | Os01g0742300 | - | Detail |
| CX1g002620 | 1:27,697,072-27,697,557 | - | C1H6g04386 | C2H6g28732 | - | - | - | Detail |
| CX1g007266 | 1:27,699,682-27,703,078 | + | C1H1g30211 | C2H1g04401 | LOC_Os01g53920 | Os01g0742400 | OsASLRK | Detail |
| CX1g000337 | 1:27,703,727-27,707,420 | - | C1H1g16829 | C2H1g05690 | LOC_Os01g53930 | Os01g0742500 | OsHXK6 | Detail |
| CX1g005919 | 1:27,709,571-27,709,925 | - | C1H1g31036 | C2H1g15551 | LOC_Os01g53940 | Os01g0742766 | - | Detail |
| CX1g007218 | 1:27,725,155-27,727,266 | + | C1H1g12146 | C2H1g26459 | LOC_Os01g53980 | Os01g0743100 | - | Detail |
| CX1g003238 | 1:27,733,528-27,736,184 | - | C1H1g13979 | C2H1g30365 | LOC_Os01g53990 | Os01g0743200 | - | Detail |
| CX1g000051 | 1:27,742,704-27,742,853 | - | - | - | - | - | - | Detail |
| CX1g000573 | 1:27,743,543-27,747,659 | + | C1H1g20416 | C2H1g07295 | LOC_Os01g54010 | Os01g0743300 | - | Detail |
| CX1g001592 | 1:27,748,379-27,754,106 | - | C1H1g03969 | C2H1g18249 | LOC_Os01g54020 | Os01g0743400 | - | Detail |
| CX1g003460 | 1:27,754,348-27,758,985 | + | C1H1g00803 | C2H1g05014 | LOC_Os01g54030 | Os01g0743500 | OscytME3 | Detail |
| CX1g004169 | 1:27,760,086-27,764,194 | - | C1H1g06840 | C2H1g00803 | LOC_Os01g54040 | Os01g0743600 | - | Detail |
| CX1g001390 | 1:27,770,343-27,771,534 | + | C1H1g16391 | C2H1g15454 | LOC_Os01g54050 | Os01g0743800 | - | Detail |
| CX1g003627 | 1:27,776,522-27,783,619 | + | C1H1g28688 | C2H1g21661 | LOC_Os01g54080 | Os01g0744000 | - | Detail |
| CX1g006644 | 1:27,784,873-27,786,552 | + | C1H1g31382 | C2H1g24378 | LOC_Os01g54090 | Os01g0744200 | - | Detail |
| CX1g000737 | 1:27,788,159-27,792,628 | - | C1H1g10444 | C2H1g18426 | LOC_Os01g54100 | Os01g0744300 | - | Detail |
| CX1g000548 | 1:27,796,888-27,797,142 | - | - | - | - | - | - | Detail |
| CX1g000340 | 1:27,797,356-27,798,956 | + | C1H1g12791 | C2H1g05632 | LOC_Os06g31220 | Os01g0643800 | - | Detail |
| CX1g000671 | 1:27,804,642-27,811,187 | - | C1H1g08595 | C2H1g18422 | LOC_Os01g54119 | Os01g0744400 | - | Detail |
| CX1g004050 | 1:27,815,275-27,815,784 | - | C1H1g04241 | C2H1g03794 | LOC_Os01g54140 | Os01g0744700 | - | Detail |