| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g28900 | 6:5,697,135-5,698,193 | + | C1H6g15439 | CX6g044911 | LOC_Os06g12360 | Os06g0228950 | - | Detail |
| C2H6g05024 | 6:5,698,908-5,701,872 | - | C1H6g14481 | CX6g043477 | LOC_Os06g12370 | Os06g0229000 | - | Detail |
| C2H6g02329 | 6:5,710,871-5,716,601 | + | C1H6g30867 | CX6g043791 | LOC_Os06g12390 | Os06g0229200 | GalT | Detail |
| C2H6g13941 | 6:5,719,681-5,727,442 | + | C1H6g06761 | CX6g041469 | LOC_Os06g12400 | Os06g0229300 | - | Detail |
| C2H6g19443 | 6:5,728,867-5,730,473 | + | C1H6g31791 | CX6g045028 | LOC_Os06g12410 | Os06g0257600 | - | Detail |
| C2H6g15100 | 6:5,731,963-5,736,797 | + | C1H6g30269 | CX6g044435 | LOC_Os06g12450 | Os06g0229800 | ALK, alk, SSII-3, OsSSIIa, OsSSII-3, SSIIa, SSS2A, OsSSIIaChr6 | Detail |
| C2H6g02967 | 6:5,741,601-5,746,594 | + | C1H6g02539 | CX6g041722 | LOC_Os06g12460 | Os06g0230100 | OsCSLA3 | Detail |
| C2H6g18393 | 6:5,755,045-5,755,854 | + | C1H6g20958 | CX6g043899 | LOC_Os06g12500 | Os06g0231050 | CASP3, OsCASP3 | Detail |
| C2H6g07579 | 6:5,756,527-5,758,080 | - | C1H6g22566 | CX6g042564 | LOC_Os06g12510 | Os06g0231100 | - | Detail |
| C2H6g25430 | 6:5,760,221-5,762,376 | + | C1H6g10940 | CX6g042953 | LOC_Os06g12530 | Os06g0231300 | ROX3 | Detail |
| C2H6g00549 | 6:5,762,707-5,764,524 | - | C1H6g22566 | CX6g044108 | LOC_Os06g03570 | Os06g0231400 | - | Detail |
| C2H6g20507 | 6:5,770,817-5,773,183 | - | C1H6g09372 | CX6g042127 | LOC_Os06g12560 | Os06g0231600 | - | Detail |
| C2H6g04942 | 6:5,776,967-5,780,407 | - | C1H6g21654 | CX6g045497 | LOC_Os06g12580 | Os06g0232000 | - | Detail |
| C2H6g06021 | 6:5,784,696-5,794,631 | - | C1H6g16903 | CX6g044039 | LOC_Os06g12590 | Os06g0232100 | - | Detail |
| C2H6g20456 | 6:5,804,890-5,810,664 | + | C1H6g16972 | CX6g043544 | LOC_Os06g12600 | Os06g0232200 | OsFRK3 | Detail |
| C2H6g11066 | 6:5,828,992-5,832,397 | + | C1H6g17211 | CX6g041379 | LOC_Os06g12610 | Os06g0232300 | OsPIN1a | Detail |
| C2H6g00896 | 6:5,829,312-5,830,534 | - | - | - | - | Os06g0232350 | - | Detail |
| C2H6g26342 | 6:5,837,559-5,838,065 | - | C1H6g01622 | CX6g043622 | LOC_Os06g12620 | Os06g0232400 | - | Detail |
| C2H6g04539 | 6:5,851,234-5,854,132 | - | C1H6g13976 | CX6g045802 | LOC_Os06g12630 | Os06g0232600 | - | Detail |
| C2H6g12736 | 6:5,855,278-5,858,915 | + | C1H6g19729 | - | LOC_Os06g12640 | Os06g0232700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046122 | 7:23,029,753-23,030,217 | - | C1H7g04724 | - | LOC_Os07g46670 | Os07g0661400 | - | Detail |
| CX7g046475 | 7:23,043,799-23,051,557 | - | C1H7g29470 | C2H7g28849 | LOC_Os07g46690 | Os07g0661550 | - | Detail |
| CX7g049623 | 7:23,055,982-23,061,223 | - | C1H7g22133 | C2H7g15671 | LOC_Os07g46700 | Os07g0661600 | - | Detail |
| CX7g049782 | 7:23,063,385-23,064,765 | - | C1H7g13026 | C2H7g03796 | LOC_Os07g46710 | Os07g0661700 | - | Detail |
| CX7g050209 | 7:23,071,893-23,073,706 | - | C1H7g10838 | C2H7g30246 | LOC_Os07g46730 | Os07g0661900 | - | Detail |
| CX7g048450 | 7:23,075,671-23,076,048 | + | C1H5g24420 | C2H5g11101 | LOC_Os05g48489 | - | - | Detail |
| CX7g046287 | 7:23,078,589-23,080,574 | + | C1H7g08630 | C2H7g27930 | LOC_Os07g46750 | Os07g0662500 | - | Detail |
| CX7g046845 | 7:23,081,815-23,084,256 | + | C1H7g11410 | C2H7g29239 | LOC_Os07g46760 | Os07g0662600 | - | Detail |
| CX7g049649 | 7:23,085,469-23,087,103 | + | C1H7g20986 | C2H7g15594 | LOC_Os07g46770 | Os07g0662700 | - | Detail |
| CX7g046471 | 7:23,088,496-23,093,949 | - | C1H7g20625 | C2H7g13375 | LOC_Os07g46780 | Os07g0662800 | - | Detail |
| CX7g047634 | 7:23,097,670-23,104,174 | + | C1H7g10113 | C2H7g09239 | LOC_Os07g46790 | Os07g0662900 | DPE2 | Detail |
| CX7g046234 | 7:23,106,505-23,106,966 | - | - | - | LOC_Os07g46800 | Os07g0663000 | - | Detail |
| CX7g046670 | 7:23,114,343-23,114,846 | + | - | - | LOC_Os07g46810 | - | - | Detail |
| CX7g048881 | 7:23,115,621-23,119,814 | - | C1H7g30677 | C2H7g05505 | LOC_Os07g46820 | Os07g0663300 | - | Detail |
| CX7g048968 | 7:23,123,509-23,124,876 | + | C1H7g13081 | C2H7g16546 | LOC_Os07g46830 | Os07g0663500 | - | Detail |
| CX7g049559 | 7:23,211,586-23,212,756 | - | C1H7g11817 | C2H7g04337 | LOC_Os07g46990 | Os07g0665200 | CSD2 | Detail |
| CX7g049968 | 7:23,213,750-23,219,014 | - | C1H7g02023 | C2H7g26684 | LOC_Os07g47000 | Os07g0665300 | - | Detail |
| CX7g049245 | 7:23,231,688-23,241,997 | + | C1H7g15272 | C2H7g18013 | - | - | - | Detail |
| CX7g050359 | 7:23,248,877-23,256,999 | - | C1H7g02023 | C2H7g05071 | LOC_Os07g47030 | Os07g0665700 | - | Detail |
| CX7g047395 | 7:23,281,432-23,286,043 | + | - | C2H7g16639 | - | - | - | Detail |