| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g27459 | 3:17,643,889-17,650,349 | - | C2H3g02896 | CX3g025874 | LOC_Os03g33590 | Os03g0448700 | - | Detail |
| C1H3g11876 | 3:17,701,003-17,705,075 | + | C2H3g09597 | CX3g025469 | LOC_Os03g33650 | Os03g0449200 | SHL4, SHO2, SHO2/SHL4, OsAGO7 | Detail |
| C1H3g10349 | 3:17,770,312-17,773,861 | - | C2H3g06387 | CX3g028866 | LOC_Os03g33012 | Os03g0444900 | OsWRKY33, OsWRKY81 | Detail |
| C1H3g26549 | 3:17,780,356-17,780,712 | - | C2H3g24450 | - | - | Os03g0444900 | OsWRKY33, OsWRKY81 | Detail |
| C1H3g16808 | 3:17,907,322-17,911,447 | - | C2H3g04259 | CX3g031079 | LOC_Os03g34040 | Os03g0452300 | - | Detail |
| C1H3g08800 | 3:17,973,712-17,976,997 | + | C2H3g20904 | CX3g026859 | LOC_Os03g34280 | Os03g0453800 | - | Detail |
| C1H3g06458 | 3:17,981,056-17,981,551 | + | C2H3g03414 | CX3g031021 | LOC_Os08g09860 | Os03g0786100 | - | Detail |
| C1H3g13672 | 3:17,981,611-17,986,020 | + | C2H3g06895 | CX3g026131 | - | Os03g0786100 | - | Detail |
| C1H3g14005 | 3:17,990,783-17,997,819 | - | C2H3g12265 | CX3g028089 | LOC_Os03g34300 | Os03g0454100 | - | Detail |
| C1H3g30334 | 3:18,065,445-18,075,548 | + | C2H3g24060 | CX3g029528 | - | Os03g0678400 | - | Detail |
| C1H3g23806 | 3:18,141,191-18,144,257 | + | C2H3g17975 | CX3g026576 | - | Os03g0759000 | - | Detail |
| C1H3g18625 | 3:18,369,083-18,384,635 | - | C2H3g10346 | CX3g027364 | LOC_Os03g35340 | Os03g0554900 | - | Detail |
| C1H3g29658 | 3:18,400,674-18,401,960 | - | C2H3g04971 | CX3g026045 | LOC_Os03g35370 | - | - | Detail |
| C1H3g29570 | 3:18,411,452-18,413,140 | - | C2H3g05979 | - | LOC_Os03g35454 | - | - | Detail |
| C1H3g05847 | 3:18,463,594-18,467,637 | + | C2H3g12208 | CX3g030899 | - | - | - | Detail |
| C1H3g05109 | 3:18,510,106-18,514,463 | + | C2H3g23939 | CX3g026628 | LOC_Os03g35600 | Os03g0556600 | SDRLK-20 | Detail |
| C1H3g10727 | 3:18,577,469-18,581,510 | + | C2H3g12208 | CX3g030899 | - | - | - | Detail |
| C1H3g15595 | 3:18,624,099-18,628,160 | + | C2H3g23939 | CX3g026628 | LOC_Os03g35600 | Os03g0556600 | SDRLK-20 | Detail |
| C1H3g27683 | 3:18,689,653-18,691,247 | - | C2H3g20317 | - | LOC_Os03g35620 | - | - | Detail |
| C1H3g27677 | 3:18,921,960-18,924,576 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046122 | 7:23,029,753-23,030,217 | - | C1H7g04724 | - | LOC_Os07g46670 | Os07g0661400 | - | Detail |
| CX7g046475 | 7:23,043,799-23,051,557 | - | C1H7g29470 | C2H7g28849 | LOC_Os07g46690 | Os07g0661550 | - | Detail |
| CX7g049623 | 7:23,055,982-23,061,223 | - | C1H7g22133 | C2H7g15671 | LOC_Os07g46700 | Os07g0661600 | - | Detail |
| CX7g049782 | 7:23,063,385-23,064,765 | - | C1H7g13026 | C2H7g03796 | LOC_Os07g46710 | Os07g0661700 | - | Detail |
| CX7g050209 | 7:23,071,893-23,073,706 | - | C1H7g10838 | C2H7g30246 | LOC_Os07g46730 | Os07g0661900 | - | Detail |
| CX7g048450 | 7:23,075,671-23,076,048 | + | C1H5g24420 | C2H5g11101 | LOC_Os05g48489 | - | - | Detail |
| CX7g046287 | 7:23,078,589-23,080,574 | + | C1H7g08630 | C2H7g27930 | LOC_Os07g46750 | Os07g0662500 | - | Detail |
| CX7g046845 | 7:23,081,815-23,084,256 | + | C1H7g11410 | C2H7g29239 | LOC_Os07g46760 | Os07g0662600 | - | Detail |
| CX7g049649 | 7:23,085,469-23,087,103 | + | C1H7g20986 | C2H7g15594 | LOC_Os07g46770 | Os07g0662700 | - | Detail |
| CX7g046471 | 7:23,088,496-23,093,949 | - | C1H7g20625 | C2H7g13375 | LOC_Os07g46780 | Os07g0662800 | - | Detail |
| CX7g047634 | 7:23,097,670-23,104,174 | + | C1H7g10113 | C2H7g09239 | LOC_Os07g46790 | Os07g0662900 | DPE2 | Detail |
| CX7g046234 | 7:23,106,505-23,106,966 | - | - | - | LOC_Os07g46800 | Os07g0663000 | - | Detail |
| CX7g046670 | 7:23,114,343-23,114,846 | + | - | - | LOC_Os07g46810 | - | - | Detail |
| CX7g048881 | 7:23,115,621-23,119,814 | - | C1H7g30677 | C2H7g05505 | LOC_Os07g46820 | Os07g0663300 | - | Detail |
| CX7g048968 | 7:23,123,509-23,124,876 | + | C1H7g13081 | C2H7g16546 | LOC_Os07g46830 | Os07g0663500 | - | Detail |
| CX7g049559 | 7:23,211,586-23,212,756 | - | C1H7g11817 | C2H7g04337 | LOC_Os07g46990 | Os07g0665200 | CSD2 | Detail |
| CX7g049968 | 7:23,213,750-23,219,014 | - | C1H7g02023 | C2H7g26684 | LOC_Os07g47000 | Os07g0665300 | - | Detail |
| CX7g049245 | 7:23,231,688-23,241,997 | + | C1H7g15272 | C2H7g18013 | - | - | - | Detail |
| CX7g050359 | 7:23,248,877-23,256,999 | - | C1H7g02023 | C2H7g05071 | LOC_Os07g47030 | Os07g0665700 | - | Detail |
| CX7g047395 | 7:23,281,432-23,286,043 | + | - | C2H7g16639 | - | - | - | Detail |