| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g29177 | 2:27,727,327-27,728,047 | - | C1H2g10199 | CX2g023592 | LOC_Os02g49410 | Os02g0725900 | HAP3K, OsHAP3K/OsNF-YB1, OsHAP3K, OsNF-YB1, nf-yb1, OsLEC1, OsNF-YB-1, NFYB1, OsEnS-41 | Detail |
| C2H2g08490 | 2:27,734,464-27,735,258 | - | - | CX2g022300 | LOC_Os02g49420 | Os02g0726000 | - | Detail |
| C2H2g29636 | 2:27,742,313-27,743,152 | - | C1H2g09874 | CX2g023852 | LOC_Os02g49440 | Os02g0726300 | - | Detail |
| C2H2g05677 | 2:27,754,641-27,758,029 | + | C1H2g05214 | CX2g019656 | LOC_Os02g49450 | Os02g0726400 | - | Detail |
| C2H2g30015 | 2:27,761,753-27,765,830 | + | C1H2g12431 | CX2g023556 | LOC_Os02g49460 | Os02g0726500 | - | Detail |
| C2H2g00814 | 2:27,768,081-27,768,764 | + | - | CX2g024926 | LOC_Os02g49470 | Os02g0726600 | - | Detail |
| C2H2g09813 | 2:27,769,254-27,771,661 | - | C1H2g21836 | CX2g023944 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| C2H2g17575 | 2:27,776,478-27,778,991 | - | C1H2g12455 | CX2g022260 | LOC_Os02g49510 | Os02g0727100 | - | Detail |
| C2H2g05996 | 2:27,780,509-27,785,880 | + | C1H2g29396 | CX2g024123 | LOC_Os02g49520 | Os02g0727300 | - | Detail |
| C2H2g05669 | 2:27,788,543-27,790,875 | - | C1H2g07912 | CX2g019961 | LOC_Os02g49530 | Os02g0727500 | - | Detail |
| C2H2g19256 | 2:27,794,670-27,795,602 | + | C1H2g26668 | CX2g023170 | LOC_Os02g49550 | Os02g0727700 | - | Detail |
| C2H2g25351 | 2:27,807,255-27,807,764 | + | C1H2g05141 | CX2g019013 | LOC_Os02g49560 | Os02g0728001 | bZIP43 | Detail |
| C2H2g28910 | 2:27,809,196-27,817,139 | - | C1H2g01405 | CX2g021134 | LOC_Os02g49570 | Os02g0728100 | - | Detail |
| C2H2g03568 | 2:27,818,993-27,819,614 | + | C1H2g31094 | CX2g022512 | LOC_Os02g49590 | Os02g0728300 | - | Detail |
| C2H2g16287 | 2:27,820,522-27,825,782 | + | C1H2g31094 | CX2g022649 | LOC_Os02g49590 | Os02g0728300 | - | Detail |
| C2H2g29677 | 2:27,820,568-27,821,645 | - | - | CX3g030699 | - | - | - | Detail |
| C2H2g04353 | 2:27,827,242-27,830,998 | - | C1H2g01710 | CX2g020763 | LOC_Os02g49600 | Os02g0728500 | - | Detail |
| C2H2g01821 | 2:27,834,839-27,836,806 | - | C1H2g15124 | CX2g020190 | LOC_Os02g49610 | Os02g0728600 | - | Detail |
| C2H2g11437 | 2:27,837,325-27,840,366 | + | C1H2g22353 | CX2g023333 | LOC_Os02g49620 | Os02g0728700 | - | Detail |
| C2H2g09268 | 2:27,841,086-27,847,518 | + | C1H2g30542 | CX2g023611 | LOC_Os02g49640 | Os02g0728800 | OsTET3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047235 | 7:22,873,093-22,873,251 | + | - | - | - | - | - | Detail |
| CX7g049101 | 7:22,890,171-22,891,490 | + | C1H7g31691 | C2H7g12521 | LOC_Os07g46480 | Os07g0658600 | - | Detail |
| CX7g046195 | 7:22,898,828-22,902,583 | - | C1H7g00341 | C2H7g18544 | LOC_Os07g46490 | Os07g0658700 | - | Detail |
| CX7g047084 | 7:22,919,649-22,921,156 | - | C1H7g11459 | C2H7g21264 | LOC_Os07g46500 | Os07g0659100 | - | Detail |
| CX7g048197 | 7:22,924,678-22,925,262 | + | C1H7g27249 | C2H7g14144 | LOC_Os07g46510 | Os07g0659300 | - | Detail |
| CX7g047768 | 7:22,926,863-22,929,763 | - | C1H7g01738 | C2H7g21379 | LOC_Os07g46520 | Os07g0659400 | - | Detail |
| CX7g046781 | 7:22,933,958-22,943,676 | - | C1H7g10347 | C2H7g03403 | LOC_Os07g46540 | Os07g0659500 | - | Detail |
| CX7g048030 | 7:22,944,833-22,946,654 | - | C1H7g02083 | C2H7g10112 | LOC_Os07g46550 | Os07g0659600 | OsANN3 | Detail |
| CX7g048452 | 7:22,947,501-22,949,766 | + | C1H7g26402 | C2H7g06360 | LOC_Os07g46555 | Os07g0659700 | - | Detail |
| CX7g046966 | 7:22,957,575-22,959,164 | + | C1H7g23597 | C2H7g26445 | LOC_Os07g46560 | Os07g0659800 | RIP6 | Detail |
| CX7g046205 | 7:22,967,393-22,971,036 | + | C1H7g30486 | C2H7g18459 | LOC_Os07g46580 | Os07g0660000 | - | Detail |
| CX7g048381 | 7:22,973,092-22,973,259 | - | - | - | - | - | - | Detail |
| CX7g049237 | 7:22,975,336-22,988,571 | - | C1H7g14415 | C2H7g00394 | LOC_Os07g46590 | Os07g0660200 | OsCHR705, CHR705 | Detail |
| CX7g047918 | 7:22,990,796-22,994,221 | - | C1H7g19507 | C2H7g06297 | LOC_Os07g46600 | Os07g0660400 | - | Detail |
| CX7g048356 | 7:22,995,139-22,996,650 | + | - | - | - | Os07g0660466 | - | Detail |
| CX7g049118 | 7:23,000,097-23,004,114 | + | C1H7g26558 | C2H7g20944 | LOC_Os07g46620 | Os07g0660700 | - | Detail |
| CX7g046328 | 7:23,005,590-23,005,961 | - | C1H7g25901 | - | - | - | - | Detail |
| CX7g048413 | 7:23,010,319-23,013,460 | + | C1H7g31070 | C2H7g20878 | LOC_Os07g46630 | Os07g0661000 | - | Detail |
| CX7g049936 | 7:23,014,719-23,020,143 | - | C1H7g11539 | C2H7g17387 | LOC_Os07g46640 | Os07g0661100 | - | Detail |
| CX7g049361 | 7:23,022,500-23,026,852 | + | C1H7g09836 | C2H7g04292 | LOC_Os07g46660 | Os07g0661300 | - | Detail |