| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g08216 | 9:9,439,248-9,439,987 | - | C2H9g30412 | CX9g057843 | LOC_Os09g18360 | Os09g0353200 | - | Detail |
| C1H9g09295 | 9:9,440,836-9,441,919 | - | C2H9g30412 | CX9g057843 | LOC_Os09g18360 | Os09g0353200 | - | Detail |
| C1H9g04955 | 9:9,454,547-9,456,631 | + | C2H9g08214 | CX9g055425 | LOC_Os09g18390 | Os09g0353400 | - | Detail |
| C1H9g29305 | 9:9,467,542-9,467,763 | + | C2H9g27520 | CX9g055425 | LOC_Os09g18520 | Os09g0354300 | - | Detail |
| C1H9g07758 | 9:9,475,327-9,476,052 | + | C2H9g11760 | CX9g055968 | LOC_Os09g18450 | Os09g0353700 | - | Detail |
| C1H9g19178 | 9:9,479,448-9,481,196 | + | C2H9g08714 | CX9g055968 | LOC_Os09g18450 | Os09g0354100 | - | Detail |
| C1H9g30762 | 9:9,486,955-9,488,698 | - | C2H9g08214 | CX9g055425 | LOC_Os09g18520 | Os09g0354300 | - | Detail |
| C1H9g24256 | 9:9,498,867-9,501,779 | - | C2H9g09770 | CX9g056896 | LOC_Os09g18530 | Os09g0355400 | - | Detail |
| C1H9g24532 | 9:9,502,391-9,502,837 | - | C2H9g15417 | CX9g055165 | LOC_Os09g18540 | Os09g0349600 | - | Detail |
| C1H9g06855 | 9:9,508,255-9,509,735 | - | C2H9g16060 | CX9g055165 | LOC_Os09g18620 | Os09g0356200 | - | Detail |
| C1H9g22899 | 9:9,551,698-9,554,089 | + | C2H9g15103 | CX9g057944 | LOC_Os09g19400 | Os09g0358700 | OsCBM1, OsMRLP15 | Detail |
| C1H9g12366 | 9:9,556,269-9,558,506 | + | C2H9g27713 | CX9g057944 | LOC_Os09g19350 | Os09g0358000 | - | Detail |
| C1H9g27368 | 9:9,564,634-9,574,634 | + | C2H9g01105 | CX3g029985 | - | - | - | Detail |
| C1H9g19813 | 9:9,574,717-9,576,498 | + | C2H9g01105 | - | - | - | - | Detail |
| C1H9g15807 | 9:9,606,819-9,610,207 | + | C2H9g12232 | CX9g055760 | LOC_Os09g18594 | Os09g0356200 | - | Detail |
| C1H9g10170 | 9:9,636,050-9,644,685 | + | C2H9g04161 | CX9g057284 | LOC_Os09g18594 | Os09g0356200 | - | Detail |
| C1H9g09829 | 9:9,636,581-9,645,430 | - | - | - | - | - | - | Detail |
| C1H9g21628 | 9:9,654,581-9,660,202 | + | C2H9g24070 | CX9g057284 | LOC_Os09g18594 | Os09g0355400 | - | Detail |
| C1H9g09637 | 9:9,672,320-9,675,940 | - | C2H9g00341 | CX9g057245 | LOC_Os09g19280 | Os09g0357400 | - | Detail |
| C1H9g20757 | 9:9,694,729-9,696,882 | - | C2H9g00341 | CX9g057245 | LOC_Os09g19330 | Os09g0357400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046160 | 7:22,759,929-22,762,740 | + | C1H7g28532 | C2H7g26760 | LOC_Os07g46280 | Os07g0656200 | Os7BGlu26 | Detail |
| CX7g049952 | 7:22,763,423-22,765,008 | - | C1H7g16097 | C2H7g13272 | - | Os07g0656300 | - | Detail |
| CX7g047793 | 7:22,765,378-22,767,854 | + | C1H7g23590 | C2H7g00060 | LOC_Os07g46300 | Os07g0656400 | - | Detail |
| CX7g047763 | 7:22,768,072-22,769,985 | - | C1H7g12301 | C2H7g17367 | LOC_Os07g46310 | - | - | Detail |
| CX7g047151 | 7:22,770,135-22,771,530 | + | C1H7g23590 | C2H7g06187 | LOC_Os07g46320 | Os07g0656600 | - | Detail |
| CX7g050396 | 7:22,772,649-22,774,669 | + | C1H7g07350 | C2H7g06619 | LOC_Os07g46330 | Os07g0656700 | - | Detail |
| CX7g048774 | 7:22,777,211-22,780,055 | + | C1H7g07717 | C2H7g02836 | LOC_Os07g46340 | Os07g0656800 | - | Detail |
| CX7g047383 | 7:22,780,912-22,786,468 | - | C1H7g07607 | C2H7g14878 | LOC_Os07g46350 | Os07g0656900 | - | Detail |
| CX7g048479 | 7:22,796,072-22,796,957 | - | C1H7g27665 | C2H7g04738 | LOC_Os07g46360 | Os07g0657100 | GLYI10, OsGLYI10, OsEnS-113, OsGly I | Detail |
| CX7g049032 | 7:22,799,106-22,808,819 | + | C1H7g27319 | C2H7g08638 | LOC_Os07g46370 | Os07g0657200 | - | Detail |
| CX7g049915 | 7:22,821,592-22,823,347 | - | - | - | - | Os07g0657300 | - | Detail |
| CX7g049142 | 7:22,830,306-22,831,915 | + | C1H7g28583 | C2H7g18935 | LOC_Os07g46390 | Os07g0657500 | - | Detail |
| CX7g047377 | 7:22,832,453-22,834,553 | - | C1H7g26054 | C2H7g14161 | LOC_Os07g46400 | Os07g0657600 | - | Detail |
| CX7g048318 | 7:22,836,996-22,841,079 | + | C1H7g18592 | C2H7g20799 | LOC_Os07g46410 | Os07g0657900 | NTRC, OsNTRC, NtrC, OsGRL15 | Detail |
| CX7g050319 | 7:22,842,223-22,843,149 | + | C1H7g03211 | C2H7g02338 | LOC_Os07g46420 | Os07g0658000 | - | Detail |
| CX7g050176 | 7:22,843,968-22,847,387 | - | C1H7g29073 | C2H7g29224 | LOC_Os07g46430 | Os07g0658100 | - | Detail |
| CX7g049648 | 7:22,847,689-22,847,883 | - | - | - | - | Os02g0188201 | - | Detail |
| CX7g047277 | 7:22,849,435-22,851,902 | - | C1H7g02626 | C2H7g06774 | LOC_Os07g46440 | Os07g0658200 | - | Detail |
| CX7g046507 | 7:22,855,579-22,864,420 | + | C1H7g11549 | C2H7g12439 | LOC_Os07g46450 | Os07g0658300 | Spin6.2, SPIN6.2 | Detail |
| CX7g049483 | 7:22,865,577-22,880,132 | - | C1H7g12828 | C2H7g11265 | LOC_Os07g46460 | Os07g0658400 | OsGLU, OsFd-GOGAT, Fd-GOGAT | Detail |