| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g23946 | 5:24,298,161-24,299,642 | + | C2H5g15674 | - | LOC_Os05g51650 | Os05g0594900 | - | Detail |
| C1H5g07547 | 5:24,299,970-24,300,566 | - | C2H5g18619 | CX5g039507 | LOC_Os05g51660 | Os05g0595000 | - | Detail |
| C1H5g22966 | 5:24,306,790-24,310,218 | + | C2H5g04566 | CX5g037190 | LOC_Os05g51670 | Os05g0595100 | OsUGE1, OsUGE-1, UGE1, UGE-1, BP1 | Detail |
| C1H5g29705 | 5:24,314,276-24,338,423 | + | C2H5g00689 | CX5g037572 | LOC_Os05g51690 | Os05g0595300 | CRCT, NRR, NRRa | Detail |
| C1H5g17200 | 5:24,314,364-24,315,098 | - | C2H5g03425 | CX5g039657 | LOC_Os05g51680 | Os05g0595200 | - | Detail |
| C1H5g10995 | 5:24,338,704-24,341,533 | - | C2H5g25216 | CX5g038125 | LOC_Os05g51700 | Os05g0595400 | - | Detail |
| C1H5g27674 | 5:24,342,371-24,344,469 | - | C2H5g14814 | CX5g041076 | LOC_Os05g51710 | Os05g0595500 | - | Detail |
| C1H5g24835 | 5:24,350,690-24,354,556 | - | C2H5g23094 | CX5g037161 | LOC_Os05g51740 | Os05g0595800 | - | Detail |
| C1H5g11204 | 5:24,357,393-24,357,937 | - | C2H5g15029 | CX5g037472 | LOC_Os05g45954 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| C1H5g19628 | 5:24,359,119-24,360,738 | + | C2H5g10878 | CX5g037109 | LOC_Os05g51750 | Os05g0596000 | - | Detail |
| C1H5g15344 | 5:24,362,940-24,363,852 | - | C2H5g03677 | CX5g040213 | LOC_Os05g51754 | Os05g0596200 | - | Detail |
| C1H5g05425 | 5:24,370,389-24,371,543 | + | C2H5g02505 | CX5g038377 | LOC_Os05g51780 | Os05g0596500 | - | Detail |
| C1H5g04142 | 5:24,380,267-24,392,932 | - | C2H5g19295 | CX5g038266 | LOC_Os05g51790 | Os05g0596600 | OsSMC5 | Detail |
| C1H5g09886 | 5:24,394,335-24,397,839 | + | C2H5g24076 | CX5g040422 | LOC_Os05g51800 | Os05g0596700 | - | Detail |
| C1H5g06124 | 5:24,399,765-24,400,578 | + | C2H5g17322 | CX5g039358 | LOC_Os05g51820 | Os05g0597000 | OsMUTE | Detail |
| C1H5g15760 | 5:24,403,463-24,406,171 | - | C2H5g24478 | CX5g038345 | LOC_Os05g51830 | Os05g0597100 | HDT1, OsHDT1, HDT701 | Detail |
| C1H5g16210 | 5:24,406,864-24,410,928 | - | C2H5g14678 | CX5g038501 | LOC_Os05g51850 | Os05g0597200 | - | Detail |
| C1H5g10848 | 5:24,413,074-24,414,807 | + | C2H5g20513 | CX5g040358 | LOC_Os05g51860 | Os05g0597400 | - | Detail |
| C1H5g07885 | 5:24,443,447-24,443,701 | - | C2H5g12335 | CX5g039366 | LOC_Os05g51900 | Os05g0597700 | - | Detail |
| C1H6g09491 | 6:33,828-40,991 | + | C2H6g15066 | CX6g041728 | LOC_Os06g01170 | Os06g0101000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046997 | 7:22,104,792-22,107,663 | - | C1H7g07549 | C2H7g04791 | LOC_Os07g39460 | Os07g0646400 | - | Detail |
| CX7g046378 | 7:22,107,644-22,112,716 | + | C1H7g04271 | C2H7g28440 | LOC_Os07g45195 | Os07g0646600 | - | Detail |
| CX7g049411 | 7:22,114,894-22,116,450 | - | C1H7g26644 | C2H7g28924 | LOC_Os07g45060 | Os07g0645000 | - | Detail |
| CX7g046754 | 7:22,119,091-22,140,683 | - | C1H7g27954 | C2H7g07480 | LOC_Os07g45070 | Os07g0645100 | - | Detail |
| CX7g048613 | 7:22,144,082-22,144,744 | + | C1H7g31200 | C2H7g13303 | LOC_Os07g45080 | Os07g0645300 | - | Detail |
| CX7g047743 | 7:22,145,952-22,149,082 | + | C1H7g07477 | C2H7g02796 | LOC_Os07g45090 | Os07g0645400 | - | Detail |
| CX7g049243 | 7:22,150,182-22,155,855 | - | C1H7g23426 | C2H7g05721 | LOC_Os07g45100 | Os07g0645500 | - | Detail |
| CX7g046432 | 7:22,159,523-22,162,690 | + | C1H7g09805 | C2H7g21775 | LOC_Os07g45010 | Os07g0645701 | - | Detail |
| CX7g048154 | 7:22,168,654-22,174,479 | - | C1H7g21814 | C2H7g06466 | LOC_Os07g45130 | Os07g0645900 | - | Detail |
| CX7g049678 | 7:22,176,686-22,186,987 | + | C1H7g30882 | C2H7g23881 | LOC_Os07g45160 | Os07g0646000 | - | Detail |
| CX7g047365 | 7:22,187,951-22,191,627 | - | C1H7g21100 | C2H7g26401 | LOC_Os07g45170 | Os07g0646100 | - | Detail |
| CX7g046992 | 7:22,192,197-22,192,376 | - | - | - | - | Os07g0596950 | - | Detail |
| CX7g048324 | 7:22,203,606-22,206,988 | - | C1H7g04271 | C2H7g23196 | LOC_Os07g45195 | Os07g0646600 | - | Detail |
| CX7g048583 | 7:22,232,353-22,233,684 | - | - | - | - | - | - | Detail |
| CX7g047035 | 7:22,236,415-22,237,646 | + | C1H7g15749 | C2H7g26047 | - | Os07g0464200 | - | Detail |
| CX7g046368 | 7:22,238,823-22,238,975 | + | C1H7g12846 | C2H7g21018 | - | - | - | Detail |
| CX7g046778 | 7:22,241,564-22,245,789 | + | C1H7g09976 | C2H7g12442 | LOC_Os07g45280 | Os07g0647100 | - | Detail |
| CX7g049147 | 7:22,246,346-22,250,392 | - | C1H7g25902 | C2H7g06956 | LOC_Os07g45290 | Os07g0647200 | - | Detail |
| CX7g047460 | 7:22,264,209-22,265,588 | + | C1H7g28064 | C2H7g06158 | LOC_Os07g45310 | Os07g0647400 | - | Detail |
| CX7g046353 | 7:22,270,738-22,272,056 | - | C1H7g23752 | C2H7g29724 | LOC_Os07g45330 | Os07g0647600 | - | Detail |