| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g04729 | 3:4,611,926-4,613,460 | - | C2H3g24222 | CX3g030929 | LOC_Os03g10210 | Os03g0198600 | HOX12, Oshox12, OsHox12, GT1 | Detail |
| C1H3g24941 | 3:4,626,118-4,626,506 | + | C2H3g01513 | - | - | - | - | Detail |
| C1H3g23090 | 3:4,634,713-4,636,287 | - | C2H3g16295 | CX3g026889 | LOC_Os03g10220 | - | - | Detail |
| C1H3g13438 | 3:4,637,520-4,640,553 | - | C2H3g19804 | CX3g026154 | LOC_Os03g10224 | Os03g0198900 | - | Detail |
| C1H3g16749 | 3:4,640,745-4,645,102 | + | C2H3g09522 | CX3g028745 | LOC_Os03g10230 | Os03g0199000 | - | Detail |
| C1H3g12272 | 3:4,650,035-4,651,210 | + | C2H3g01585 | CX3g029096 | LOC_Os03g10240 | Os03g0199100 | - | Detail |
| C1H3g00274 | 3:4,660,923-4,662,003 | - | C2H3g23420 | CX3g031305 | LOC_Os03g10260 | Os03g0199500 | - | Detail |
| C1H3g07008 | 3:4,678,681-4,679,923 | + | C2H3g26891 | CX3g025392 | LOC_Os03g10300 | Os03g0200000 | - | Detail |
| C1H3g12286 | 3:4,687,802-4,689,563 | + | C2H3g01636 | CX3g029912 | LOC_Os03g10320 | Os03g0200200 | - | Detail |
| C1H3g29696 | 3:4,695,612-4,696,359 | + | C2H3g23926 | CX3g028962 | - | - | - | Detail |
| C1H3g13020 | 3:4,697,511-4,699,802 | + | C2H3g07176 | CX3g025427 | LOC_Os03g10340 | Os03g0200500 | - | Detail |
| C1H3g29298 | 3:4,699,933-4,704,069 | - | C2H3g17766 | CX3g027963 | LOC_Os03g10350 | Os03g0200600 | OsTPR075 | Detail |
| C1H3g01933 | 3:4,707,172-4,710,106 | - | C2H3g08890 | CX3g025362 | LOC_Os03g10360 | Os03g0200700 | - | Detail |
| C1H3g30301 | 3:4,711,278-4,713,578 | - | C2H3g09465 | CX3g031231 | LOC_Os03g10370 | Os03g0200800 | - | Detail |
| C1H3g28372 | 3:4,717,317-4,719,594 | + | C2H3g19650 | CX3g028366 | LOC_Os03g10390 | Os03g0201000 | - | Detail |
| C1H3g07769 | 3:4,719,979-4,724,128 | - | C2H3g21201 | CX3g026809 | LOC_Os03g10400 | Os03g0201100 | - | Detail |
| C1H3g03267 | 3:4,724,286-4,726,332 | + | C2H3g08749 | - | LOC_Os03g10410 | Os03g0201200 | - | Detail |
| C1H3g26783 | 3:4,726,856-4,729,237 | + | C2H3g27980 | CX3g027641 | LOC_Os03g10420 | Os03g0201400 | - | Detail |
| C1H3g14289 | 3:4,739,963-4,742,807 | + | C2H3g05108 | CX3g026129 | LOC_Os03g10440 | Os03g0201500 | OsMORE1a | Detail |
| C1H3g07517 | 3:4,743,790-4,746,012 | - | C2H3g04674 | CX3g029780 | LOC_Os03g10450 | Os03g0201600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048214 | 7:21,698,577-21,700,238 | + | C1H7g29132 | C2H7g26688 | LOC_Os07g44130 | Os07g0635300 | - | Detail |
| CX7g046927 | 7:21,706,209-21,707,887 | + | C1H7g21192 | C2H7g03243 | LOC_Os07g44140 | Os07g0635500 | - | Detail |
| CX7g047263 | 7:21,713,039-21,715,446 | + | C1H7g17502 | C2H7g30551 | LOC_Os07g44140 | Os07g0635700 | - | Detail |
| CX7g048404 | 7:21,716,037-21,718,154 | + | C1H7g18607 | C2H7g09407 | LOC_Os07g44170 | Os07g0635800 | - | Detail |
| CX7g047931 | 7:21,722,446-21,722,742 | + | C1H7g17160 | C2H7g29761 | LOC_Os07g44180 | Os07g0635900 | OsLti6a | Detail |
| CX7g046668 | 7:21,725,682-21,727,490 | - | C1H7g05026 | C2H7g09692 | LOC_Os07g44190 | Os07g0636000 | - | Detail |
| CX7g046275 | 7:21,729,966-21,731,117 | + | C1H7g28888 | C2H7g06149 | LOC_Os07g44200 | Os07g0636100 | - | Detail |
| CX7g046129 | 7:21,733,741-21,745,568 | + | C1H7g02710 | C2H7g03102 | LOC_Os07g44210 | Os07g0636200 | - | Detail |
| CX7g049261 | 7:21,746,722-21,748,300 | + | C1H7g19732 | C2H7g25894 | LOC_Os07g44230 | Os07g0636400 | - | Detail |
| CX7g048303 | 7:21,781,704-21,785,917 | + | C1H7g24530 | C2H7g18794 | LOC_Os07g44290 | Os07g0637000 | - | Detail |
| CX7g046440 | 7:21,786,277-21,787,983 | - | C1H7g30359 | C2H7g11193 | LOC_Os07g44299 | Os07g0636900 | - | Detail |
| CX7g049477 | 7:21,791,098-21,792,362 | + | C1H7g01565 | C2H7g21100 | LOC_Os07g44310 | Os07g0637150 | - | Detail |
| CX7g048301 | 7:21,794,162-21,797,313 | - | C1H7g09543 | C2H7g00923 | LOC_Os07g44320 | Os07g0637200 | - | Detail |
| CX7g047315 | 7:21,802,690-21,806,044 | - | C1H7g15005 | C2H7g00319 | LOC_Os07g44330 | Os07g0637300 | PDK, OsHRK1 | Detail |
| CX7g047778 | 7:21,814,332-21,816,690 | + | C1H7g01043 | C2H7g23751 | LOC_Os07g44350 | Os07g0637400 | OsNPSN13 | Detail |
| CX7g047539 | 7:21,817,315-21,823,350 | - | C1H7g13188 | C2H7g21707 | LOC_Os07g44360 | Os07g0637600 | - | Detail |
| CX7g047082 | 7:21,825,252-21,825,749 | - | - | - | LOC_Os07g41270 | Os07g0104750 | - | Detail |
| CX7g048697 | 7:21,830,885-21,831,481 | + | C1H7g11156 | C2H7g01780 | LOC_Os07g44370 | Os07g0637700 | - | Detail |
| CX7g048390 | 7:21,832,398-21,833,018 | + | C1H7g11156 | C2H7g01780 | LOC_Os07g44380 | Os07g0636800 | - | Detail |
| CX7g048959 | 7:21,839,670-21,850,913 | - | C1H7g17801 | C2H7g24389 | LOC_Os07g44400 | Os07g0638000 | - | Detail |