| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g15340 | 5:1,779,981-1,784,195 | + | C1H5g15318 | CX5g039240 | LOC_Os05g04520 | Os05g0135800 | RLCK178, OsPti1a, OsRLCK178 | Detail |
| C2H5g09071 | 5:1,784,743-1,786,926 | - | C1H5g22825 | CX5g040556 | LOC_Os05g04530 | Os05g0135900 | - | Detail |
| C2H5g11738 | 5:1,798,378-1,799,442 | + | - | CX5g040743 | LOC_Os05g04540 | Os05g0136100 | - | Detail |
| C2H5g01548 | 5:1,800,699-1,804,493 | - | C1H5g10755 | CX5g039210 | LOC_Os05g04550 | Os05g0136200 | - | Detail |
| C2H5g23155 | 5:1,829,551-1,835,745 | + | C1H5g30580 | CX5g040521 | LOC_Os05g04584 | Os05g0136900 | OsPMT2, OsAT3 | Detail |
| C2H5g15489 | 5:1,843,721-1,844,729 | + | - | - | - | - | - | Detail |
| C2H5g06046 | 5:1,849,609-1,855,994 | + | C1H5g18480 | CX5g040420 | LOC_Os05g04610 | Os05g0137200 | - | Detail |
| C2H5g14079 | 5:1,857,180-1,858,849 | + | C1H5g19392 | CX5g039843 | LOC_Os05g04620 | Os05g0137300 | - | Detail |
| C2H5g14963 | 5:1,859,884-1,863,799 | + | C1H5g26357 | CX5g040603 | LOC_Os05g04630 | Os05g0137400 | - | Detail |
| C2H5g23559 | 5:1,864,493-1,869,943 | - | C1H5g12317 | CX5g036724 | LOC_Os05g04640 | Os05g0137500 | OsWRKY5 | Detail |
| C2H5g03222 | 5:1,881,639-1,882,913 | + | C1H5g04306 | CX5g037574 | LOC_Os05g04650 | Os05g0137600 | - | Detail |
| C2H5g28363 | 5:1,883,175-1,884,682 | - | C1H5g13155 | - | LOC_Os05g04660 | Os05g0137700 | - | Detail |
| C2H5g07352 | 5:1,899,671-1,900,263 | - | C1H5g04433 | CX1g002314 | LOC_Os05g04700 | Os05g0138300 | OsLti6b | Detail |
| C2H5g19962 | 5:1,916,898-1,919,055 | + | C1H5g25088 | CX5g037589 | LOC_Os05g04740 | Os05g0139100 | APG | Detail |
| C2H5g25266 | 5:1,922,063-1,923,286 | - | C1H5g25511 | CX5g037123 | LOC_Os05g04750 | Os05g0139200 | - | Detail |
| C2H5g23665 | 5:1,933,084-1,934,268 | - | C1H5g18751 | CX5g037123 | LOC_Os05g04770 | Os05g0139300 | - | Detail |
| C2H5g30393 | 5:1,934,410-1,935,053 | + | - | - | - | - | - | Detail |
| C2H5g03061 | 5:1,970,541-1,971,097 | - | C1H5g17291 | CX5g038058 | - | Os05g0140000 | - | Detail |
| C2H5g22528 | 5:1,971,471-1,974,178 | + | C1H5g01364 | CX5g041027 | LOC_Os05g04820 | Os05g0140100 | - | Detail |
| C2H5g28238 | 5:1,982,372-1,984,229 | + | C1H1g13588 | CX5g039047 | LOC_Os05g04830 | Os05g0140300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000533 | 1:27,553,317-27,556,874 | + | C1H1g10504 | C2H1g22385 | LOC_Os01g53670 | Os01g0738600 | - | Detail |
| CX1g000235 | 1:27,563,201-27,568,179 | - | C1H1g24320 | C2H1g29572 | LOC_Os01g53680 | Os01g0738800 | - | Detail |
| CX1g004470 | 1:27,570,817-27,576,084 | - | C1H1g12855 | C2H1g23624 | LOC_Os01g53700 | Os01g0739000 | - | Detail |
| CX1g005768 | 1:27,586,118-27,589,238 | + | C1H1g24492 | C2H1g10920 | LOC_Os01g53710 | Os01g0739200 | - | Detail |
| CX1g007225 | 1:27,590,707-27,590,943 | + | - | - | LOC_Os01g54280 | Os01g0930300 | - | Detail |
| CX1g005163 | 1:27,592,274-27,598,636 | + | C1H1g03337 | C2H1g15871 | LOC_Os01g53720 | Os01g0739400 | - | Detail |
| CX1g004558 | 1:27,599,237-27,599,863 | - | C1H1g05863 | C2H1g19412 | LOC_Os01g53730 | Os01g0739500 | - | Detail |
| CX1g002993 | 1:27,612,813-27,615,630 | + | C1H1g02213 | C2H1g01037 | LOC_Os01g53750 | Os01g0739700 | - | Detail |
| CX1g004793 | 1:27,617,593-27,617,928 | - | - | - | LOC_Os01g53770 | Os01g0740000 | - | Detail |
| CX1g004055 | 1:27,622,689-27,626,788 | + | C1H1g15341 | C2H1g15894 | LOC_Os01g53790 | Os01g0740400 | - | Detail |
| CX1g000355 | 1:27,628,819-27,633,127 | - | C1H1g11923 | C2H1g04268 | LOC_Os01g53800 | Os01g0740500 | - | Detail |
| CX1g002299 | 1:27,635,302-27,639,129 | - | C1H1g10172 | C2H1g07977 | LOC_Os01g53810 | Os01g0740600 | - | Detail |
| CX1g002753 | 1:27,642,971-27,647,740 | - | C1H1g11507 | C2H1g07420 | LOC_Os01g53840 | Os01g0741200 | - | Detail |
| CX1g007200 | 1:27,661,664-27,661,837 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g002728 | 1:27,662,481-27,662,741 | - | - | - | - | - | - | Detail |
| CX1g006967 | 1:27,663,737-27,665,805 | + | C1H1g07113 | C2H1g06484 | LOC_Os01g53880 | Os01g0741900 | IAA6, OsIAA6 | Detail |
| CX1g004930 | 1:27,671,685-27,671,834 | + | - | - | LOC_Os01g57956 | - | - | Detail |
| CX1g000527 | 1:27,673,267-27,674,304 | - | - | - | LOC_Os01g53890 | Os01g0742000 | - | Detail |
| CX1g004012 | 1:27,674,819-27,675,085 | + | - | - | - | Os01g0742100 | - | Detail |
| CX1g004845 | 1:27,680,501-27,683,775 | + | C1H1g17968 | C2H1g24480 | LOC_Os01g53900 | Os01g0742200 | - | Detail |