| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g16607 | 2:7,830,052-7,830,681 | - | C1H2g09152 | CX2g020098 | LOC_Os02g15080 | Os02g0178600 | - | Detail |
| C2H2g25041 | 2:7,832,293-7,834,091 | - | C1H2g03589 | CX2g019611 | LOC_Os02g15070 | Os02g0248800 | - | Detail |
| C2H2g29377 | 2:7,839,932-7,841,746 | - | C1H2g22435 | CX2g019611 | LOC_Os02g15090 | Os02g0249000 | GLUD1, GluD1, GluD-1, OsEnS-33 | Detail |
| C2H2g29796 | 2:7,865,918-7,867,304 | + | C1H2g14225 | CX2g024165 | LOC_Os02g15140 | Os02g0249500 | - | Detail |
| C2H2g27895 | 2:7,886,184-7,888,058 | - | C1H2g31875 | CX2g020506 | LOC_Os02g15160 | Os02g0249700 | - | Detail |
| C2H2g30056 | 2:7,894,512-7,896,331 | - | C1H2g23896 | CX2g019611 | LOC_Os02g15178 | Os02g0249800 | - | Detail |
| C2H2g20324 | 2:7,899,981-7,901,800 | + | C1H2g23896 | CX2g019611 | LOC_Os02g15169 | Os02g0249900 | - | Detail |
| C2H2g17924 | 2:7,915,114-7,922,971 | + | C1H2g06356 | CX2g022131 | LOC_Os02g15220 | Os02g0250300 | OsGTE4 | Detail |
| C2H2g13396 | 2:7,925,910-7,929,407 | + | C1H2g12357 | CX2g022354 | LOC_Os02g15230 | Os02g0250400 | BS1, OsGELP33 | Detail |
| C2H2g03256 | 2:7,950,129-7,954,907 | - | C1H2g07509 | CX2g022128 | - | - | - | Detail |
| C2H2g19821 | 2:7,954,163-7,956,556 | + | C1H2g16469 | CX2g023206 | LOC_Os02g15270 | Os02g0251700 | - | Detail |
| C2H2g27477 | 2:7,970,037-7,974,400 | - | C1H2g12332 | CX2g020535 | LOC_Os02g15310 | Os02g0252100 | OsSCL30a | Detail |
| C2H2g02364 | 2:7,993,735-7,995,144 | + | C1H2g26833 | CX2g021498 | LOC_Os02g15340 | Os02g0252200 | - | Detail |
| C2H2g11974 | 2:8,000,199-8,001,344 | - | C1H2g16698 | CX2g020199 | LOC_Os02g15350 | Os02g0252400 | RPBF, OsDof3, OsDOF3, OsEnS-34, OsDof10, Dof10, OsDof-10, OsDOF1, DOF1, DOF3 | Detail |
| C2H2g21408 | 2:8,009,303-8,011,587 | - | C1H2g12137 | CX2g021836 | LOC_Os02g15360 | Os02g0252600 | - | Detail |
| C2H2g09029 | 2:8,020,214-8,020,899 | - | C1H2g12137 | CX2g021836 | LOC_Os02g15360 | Os02g0252600 | - | Detail |
| C2H2g22380 | 2:8,030,648-8,032,504 | - | C1H2g17825 | CX2g024046 | LOC_Os02g15520 | Os02g0254550 | - | Detail |
| C2H2g23473 | 2:8,044,581-8,045,009 | - | C1H2g01415 | CX2g020061 | LOC_Os02g15540 | Os02g0254600 | - | Detail |
| C2H2g25388 | 2:8,061,562-8,065,848 | - | C1H2g02874 | CX2g023976 | LOC_Os02g15550 | Os02g0254700 | - | Detail |
| C2H2g17278 | 2:8,079,081-8,088,006 | - | C1H2g18691 | CX2g021174 | LOC_Os02g15580 | Os02g0255000 | OsCNGC1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000533 | 1:27,553,317-27,556,874 | + | C1H1g10504 | C2H1g22385 | LOC_Os01g53670 | Os01g0738600 | - | Detail |
| CX1g000235 | 1:27,563,201-27,568,179 | - | C1H1g24320 | C2H1g29572 | LOC_Os01g53680 | Os01g0738800 | - | Detail |
| CX1g004470 | 1:27,570,817-27,576,084 | - | C1H1g12855 | C2H1g23624 | LOC_Os01g53700 | Os01g0739000 | - | Detail |
| CX1g005768 | 1:27,586,118-27,589,238 | + | C1H1g24492 | C2H1g10920 | LOC_Os01g53710 | Os01g0739200 | - | Detail |
| CX1g007225 | 1:27,590,707-27,590,943 | + | - | - | LOC_Os01g54280 | Os01g0930300 | - | Detail |
| CX1g005163 | 1:27,592,274-27,598,636 | + | C1H1g03337 | C2H1g15871 | LOC_Os01g53720 | Os01g0739400 | - | Detail |
| CX1g004558 | 1:27,599,237-27,599,863 | - | C1H1g05863 | C2H1g19412 | LOC_Os01g53730 | Os01g0739500 | - | Detail |
| CX1g002993 | 1:27,612,813-27,615,630 | + | C1H1g02213 | C2H1g01037 | LOC_Os01g53750 | Os01g0739700 | - | Detail |
| CX1g004793 | 1:27,617,593-27,617,928 | - | - | - | LOC_Os01g53770 | Os01g0740000 | - | Detail |
| CX1g004055 | 1:27,622,689-27,626,788 | + | C1H1g15341 | C2H1g15894 | LOC_Os01g53790 | Os01g0740400 | - | Detail |
| CX1g000355 | 1:27,628,819-27,633,127 | - | C1H1g11923 | C2H1g04268 | LOC_Os01g53800 | Os01g0740500 | - | Detail |
| CX1g002299 | 1:27,635,302-27,639,129 | - | C1H1g10172 | C2H1g07977 | LOC_Os01g53810 | Os01g0740600 | - | Detail |
| CX1g002753 | 1:27,642,971-27,647,740 | - | C1H1g11507 | C2H1g07420 | LOC_Os01g53840 | Os01g0741200 | - | Detail |
| CX1g007200 | 1:27,661,664-27,661,837 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g002728 | 1:27,662,481-27,662,741 | - | - | - | - | - | - | Detail |
| CX1g006967 | 1:27,663,737-27,665,805 | + | C1H1g07113 | C2H1g06484 | LOC_Os01g53880 | Os01g0741900 | IAA6, OsIAA6 | Detail |
| CX1g004930 | 1:27,671,685-27,671,834 | + | - | - | LOC_Os01g57956 | - | - | Detail |
| CX1g000527 | 1:27,673,267-27,674,304 | - | - | - | LOC_Os01g53890 | Os01g0742000 | - | Detail |
| CX1g004012 | 1:27,674,819-27,675,085 | + | - | - | - | Os01g0742100 | - | Detail |
| CX1g004845 | 1:27,680,501-27,683,775 | + | C1H1g17968 | C2H1g24480 | LOC_Os01g53900 | Os01g0742200 | - | Detail |