| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19784 | 4:27,335,340-27,336,862 | - | C2H4g04663 | CX4g035396 | LOC_Os04g52720 | Os04g0617900 | - | Detail |
| C1H4g16144 | 4:27,341,358-27,345,597 | + | C2H4g20761 | CX4g036359 | - | - | - | Detail |
| C1H4g21738 | 4:27,347,008-27,350,734 | + | C2H4g14147 | CX4g032842 | LOC_Os04g52730 | Os04g0618200 | - | Detail |
| C1H4g28262 | 4:27,354,171-27,354,467 | + | C2H4g20866 | CX4g034575 | LOC_Os04g52750 | Os04g0618400 | - | Detail |
| C1H4g01403 | 4:27,355,456-27,359,541 | - | C2H4g09538 | CX4g035558 | LOC_Os04g52760 | Os04g0618500 | - | Detail |
| C1H4g16234 | 4:27,361,688-27,362,774 | + | C2H4g06850 | CX4g034460 | LOC_Os04g52770 | Os04g0618600 | PIF1 | Detail |
| C1H4g28199 | 4:27,363,964-27,368,068 | - | C2H4g10397 | CX4g034704 | LOC_Os04g52780 | Os04g0618700 | OsFLS2 | Detail |
| C1H4g22303 | 4:27,382,282-27,385,360 | - | C2H4g00816 | CX4g036144 | LOC_Os04g52810 | Os04g0619000 | ONAC083 | Detail |
| C1H4g07288 | 4:27,389,779-27,391,289 | + | - | - | LOC_Os04g52820 | - | - | Detail |
| C1H4g06933 | 4:27,391,734-27,392,098 | + | C2H4g08987 | CX4g032452 | - | - | - | Detail |
| C1H4g18636 | 4:27,400,694-27,403,858 | + | C2H4g28780 | CX4g031427 | LOC_Os04g52830 | Os04g0619300 | Ctb1 | Detail |
| C1H4g13931 | 4:27,404,926-27,408,291 | - | C2H4g02197 | CX4g035196 | LOC_Os04g52840 | Os04g0619400 | OsRLCK160 | Detail |
| C1H4g15202 | 4:27,414,637-27,417,536 | + | C2H4g23444 | CX4g033062 | LOC_Os04g52850 | Os04g0619500 | - | Detail |
| C1H4g24641 | 4:27,419,171-27,421,705 | - | C2H4g18841 | CX4g033748 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| C1H4g04907 | 4:27,425,704-27,428,943 | - | C2H4g25907 | - | - | - | - | Detail |
| C1H4g18235 | 4:27,441,312-27,446,700 | + | C2H4g06612 | CX4g036286 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| C1H4g18046 | 4:27,447,425-27,459,871 | - | C2H4g03746 | CX4g032062 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| C1H4g10267 | 4:27,463,348-27,464,456 | - | - | - | - | - | - | Detail |
| C1H4g11396 | 4:27,467,836-27,470,683 | + | C2H4g02835 | CX4g031475 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| C1H4g16306 | 4:27,471,210-27,471,907 | - | - | - | LOC_Os04g52930 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000533 | 1:27,553,317-27,556,874 | + | C1H1g10504 | C2H1g22385 | LOC_Os01g53670 | Os01g0738600 | - | Detail |
| CX1g000235 | 1:27,563,201-27,568,179 | - | C1H1g24320 | C2H1g29572 | LOC_Os01g53680 | Os01g0738800 | - | Detail |
| CX1g004470 | 1:27,570,817-27,576,084 | - | C1H1g12855 | C2H1g23624 | LOC_Os01g53700 | Os01g0739000 | - | Detail |
| CX1g005768 | 1:27,586,118-27,589,238 | + | C1H1g24492 | C2H1g10920 | LOC_Os01g53710 | Os01g0739200 | - | Detail |
| CX1g007225 | 1:27,590,707-27,590,943 | + | - | - | LOC_Os01g54280 | Os01g0930300 | - | Detail |
| CX1g005163 | 1:27,592,274-27,598,636 | + | C1H1g03337 | C2H1g15871 | LOC_Os01g53720 | Os01g0739400 | - | Detail |
| CX1g004558 | 1:27,599,237-27,599,863 | - | C1H1g05863 | C2H1g19412 | LOC_Os01g53730 | Os01g0739500 | - | Detail |
| CX1g002993 | 1:27,612,813-27,615,630 | + | C1H1g02213 | C2H1g01037 | LOC_Os01g53750 | Os01g0739700 | - | Detail |
| CX1g004793 | 1:27,617,593-27,617,928 | - | - | - | LOC_Os01g53770 | Os01g0740000 | - | Detail |
| CX1g004055 | 1:27,622,689-27,626,788 | + | C1H1g15341 | C2H1g15894 | LOC_Os01g53790 | Os01g0740400 | - | Detail |
| CX1g000355 | 1:27,628,819-27,633,127 | - | C1H1g11923 | C2H1g04268 | LOC_Os01g53800 | Os01g0740500 | - | Detail |
| CX1g002299 | 1:27,635,302-27,639,129 | - | C1H1g10172 | C2H1g07977 | LOC_Os01g53810 | Os01g0740600 | - | Detail |
| CX1g002753 | 1:27,642,971-27,647,740 | - | C1H1g11507 | C2H1g07420 | LOC_Os01g53840 | Os01g0741200 | - | Detail |
| CX1g007200 | 1:27,661,664-27,661,837 | - | - | - | - | Os02g0188201 | - | Detail |
| CX1g002728 | 1:27,662,481-27,662,741 | - | - | - | - | - | - | Detail |
| CX1g006967 | 1:27,663,737-27,665,805 | + | C1H1g07113 | C2H1g06484 | LOC_Os01g53880 | Os01g0741900 | IAA6, OsIAA6 | Detail |
| CX1g004930 | 1:27,671,685-27,671,834 | + | - | - | LOC_Os01g57956 | - | - | Detail |
| CX1g000527 | 1:27,673,267-27,674,304 | - | - | - | LOC_Os01g53890 | Os01g0742000 | - | Detail |
| CX1g004012 | 1:27,674,819-27,675,085 | + | - | - | - | Os01g0742100 | - | Detail |
| CX1g004845 | 1:27,680,501-27,683,775 | + | C1H1g17968 | C2H1g24480 | LOC_Os01g53900 | Os01g0742200 | - | Detail |