| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05108 | 3:4,707,270-4,710,116 | + | C1H3g14289 | CX3g026129 | LOC_Os03g10440 | Os03g0201500 | OsMORE1a | Detail |
| C2H3g04674 | 3:4,711,100-4,713,323 | - | C1H3g07517 | CX3g029780 | LOC_Os03g10450 | Os03g0201600 | - | Detail |
| C2H3g27684 | 3:4,714,151-4,716,867 | + | C1H3g08866 | CX3g025008 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| C2H3g15317 | 3:4,716,730-4,720,061 | - | C1H3g26823 | CX3g027908 | LOC_Os03g10469 | Os03g0201800 | - | Detail |
| C2H3g07444 | 3:4,720,624-4,725,054 | - | C1H3g22443 | CX3g027908 | LOC_Os03g10478 | Os03g0201901 | - | Detail |
| C2H3g09161 | 3:4,730,604-4,734,181 | - | C1H3g14443 | CX3g028036 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| C2H3g24025 | 3:4,736,414-4,740,022 | - | C1H3g22113 | CX3g026152 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| C2H3g13194 | 3:4,741,051-4,745,017 | - | C1H3g27837 | CX3g030169 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| C2H3g17561 | 3:4,746,437-4,749,472 | - | C1H3g27666 | CX3g025689 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| C2H3g21513 | 3:4,752,859-4,759,444 | + | C1H3g27625 | CX3g029844 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| C2H3g08169 | 3:4,771,694-4,772,873 | + | C1H3g03653 | CX3g027943 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| C2H3g27974 | 3:4,783,031-4,789,961 | + | C1H3g22146 | CX3g027605 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| C2H3g08201 | 3:4,792,026-4,793,503 | - | C1H3g29891 | CX3g028482 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| C2H3g30001 | 3:4,812,950-4,817,305 | + | C1H3g06442 | CX3g026677 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| C2H3g23547 | 3:4,820,796-4,821,985 | + | C1H3g30369 | CX3g029117 | LOC_Os03g10730 | - | - | Detail |
| C2H3g15767 | 3:4,829,271-4,829,690 | - | C1H3g08546 | - | LOC_Os03g10710 | Os03g0204500 | - | Detail |
| C2H3g08384 | 3:4,832,991-4,834,679 | + | C1H3g00980 | CX3g029117 | LOC_Os03g10730 | - | - | Detail |
| C2H3g07827 | 3:4,838,784-4,841,678 | + | C1H3g16112 | CX3g030767 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| C2H3g15453 | 3:4,842,534-4,842,952 | - | C1H3g05329 | - | LOC_Os03g10740 | Os03g0204900 | - | Detail |
| C2H3g17885 | 3:4,844,672-4,850,468 | - | C1H3g13244 | CX3g028803 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047496 | 7:20,974,482-20,978,179 | + | C1H7g03804 | C2H7g03490 | LOC_Os07g42700 | Os07g0619100 | - | Detail |
| CX7g048538 | 7:20,983,146-20,983,421 | + | C1H7g28150 | - | LOC_Os07g42730 | Os07g0619200 | - | Detail |
| CX7g047903 | 7:20,989,138-20,989,608 | + | C1H7g28380 | - | LOC_Os07g42730 | Os07g0619400 | - | Detail |
| CX7g048820 | 7:20,996,044-20,997,045 | + | C1H7g19425 | - | LOC_Os07g42740 | Os07g0619500 | - | Detail |
| CX7g046877 | 7:21,002,128-21,010,823 | + | C1H7g15902 | C2H7g01226 | LOC_Os07g42750 | Os07g0619600 | - | Detail |
| CX7g047900 | 7:21,012,328-21,016,641 | - | C1H7g28217 | C2H7g30581 | LOC_Os07g42760 | Os07g0619700 | - | Detail |
| CX7g046040 | 7:21,018,315-21,022,914 | - | C1H7g13154 | C2H7g09952 | LOC_Os07g42770 | Os07g0619800 | - | Detail |
| CX7g048132 | 7:21,032,280-21,033,248 | + | C1H7g05939 | C2H7g02445 | LOC_Os07g42790 | - | - | Detail |
| CX7g050227 | 7:21,033,805-21,035,007 | + | C1H7g19542 | C2H7g30397 | LOC_Os07g42800 | Os07g0620200 | - | Detail |
| CX7g050012 | 7:21,037,870-21,042,121 | + | C1H7g00449 | C2H7g18149 | LOC_Os07g42810 | Os07g0620300 | - | Detail |
| CX7g048121 | 7:21,042,947-21,044,937 | - | C1H7g26068 | C2H7g15212 | LOC_Os07g42820 | Os07g0620400 | - | Detail |
| CX7g046220 | 7:21,045,578-21,047,744 | + | C1H7g12480 | C2H7g20103 | - | Os07g0620500 | - | Detail |
| CX7g047720 | 7:21,048,721-21,049,911 | + | C1H7g00333 | C2H7g03062 | LOC_Os07g42834 | Os07g0620600 | - | Detail |
| CX7g046573 | 7:21,059,285-21,061,055 | - | C1H7g06773 | C2H7g30349 | LOC_Os07g42860 | Os07g0620800 | - | Detail |
| CX7g048587 | 7:21,067,112-21,069,094 | + | C1H7g21770 | C2H7g15267 | LOC_Os07g42880 | Os07g0621100 | - | Detail |
| CX7g049795 | 7:21,071,194-21,072,859 | + | C1H7g13514 | C2H7g06560 | LOC_Os07g42890 | Os07g0621300 | - | Detail |
| CX7g047928 | 7:21,073,660-21,073,812 | - | - | - | - | - | - | Detail |
| CX7g046527 | 7:21,075,137-21,081,836 | - | C1H7g14389 | C2H7g15654 | LOC_Os07g42900 | Os07g0621500 | - | Detail |
| CX7g048093 | 7:21,084,036-21,085,875 | - | C1H7g01534 | C2H7g06298 | LOC_Os07g42910 | Os03g0390400 | - | Detail |
| CX7g049347 | 7:21,086,569-21,092,778 | - | C1H7g03971 | C2H7g09180 | LOC_Os07g42924 | Os07g0621800 | - | Detail |