| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g16452 | 3:33,046,539-33,047,911 | - | C1H3g04119 | CX3g031284 | LOC_Os03g64340 | Os03g0861400 | - | Detail |
| C2H3g12472 | 3:33,054,436-33,059,715 | - | C1H3g17429 | CX3g030656 | LOC_Os03g64350 | Os03g0861700 | - | Detail |
| C2H3g08959 | 3:33,059,879-33,062,631 | + | C1H3g24824 | CX3g028909 | LOC_Os03g64360 | Os03g0861800 | - | Detail |
| C2H3g16629 | 3:33,072,868-33,079,793 | + | C1H3g08341 | CX3g029193 | LOC_Os03g64400 | Os03g0862100 | - | Detail |
| C2H3g28738 | 3:33,082,826-33,084,731 | - | - | CX3g027325 | LOC_Os03g64415 | - | - | Detail |
| C2H4g04859 | 4:3,816-6,198 | + | C1H6g20714 | CX6g041752 | LOC_Os06g01840 | Os06g0107600 | - | Detail |
| C2H4g12961 | 4:6,554-8,915 | - | C1H6g26100 | CX6g042457 | LOC_Os06g01850 | Os06g0107700 | OsLFNR2, LFNR2, FNR | Detail |
| C2H4g04026 | 4:11,903-12,487 | - | - | CX6g041557 | LOC_Os06g01860 | Os06g0107800 | BPH29 | Detail |
| C2H4g21175 | 4:18,091-18,357 | + | C1H6g12285 | CX6g042594 | LOC_Os06g01890 | Os06g0108500 | - | Detail |
| C2H4g10486 | 4:20,285-22,820 | + | C1H6g01350 | CX6g042594 | LOC_Os06g01890 | Os06g0108500 | - | Detail |
| C2H4g22338 | 4:23,536-24,372 | - | - | CX6g042160 | LOC_Os06g01920 | Os06g0108600 | - | Detail |
| C2H4g13792 | 4:35,633-38,645 | + | C1H6g04390 | CX6g043309 | LOC_Os06g01934 | - | - | Detail |
| C2H4g26823 | 4:39,446-40,543 | - | - | CX6g041477 | LOC_Os06g01950 | Os06g0109000 | - | Detail |
| C2H4g18764 | 4:42,224-42,691 | - | - | CX6g041174 | LOC_Os06g01960 | Os06g0109100 | - | Detail |
| C2H4g20581 | 4:50,539-52,867 | - | C1H4g20758 | - | - | - | - | Detail |
| C2H4g20979 | 4:57,481-57,976 | - | C1H4g13734 | CX4g036368 | - | - | - | Detail |
| C2H4g12191 | 4:104,764-106,551 | - | C1H4g16035 | - | - | - | - | Detail |
| C2H4g13233 | 4:105,552-108,242 | + | C1H4g00861 | CX4g032894 | LOC_Os04g01070 | Os04g0100300 | - | Detail |
| C2H4g05647 | 4:152,099-161,042 | + | C1H4g00970 | CX4g034809 | LOC_Os04g01130 | Os04g0101300 | - | Detail |
| C2H4g16448 | 4:162,988-164,816 | - | C1H4g04170 | CX4g034027 | LOC_Os04g01140 | Os04g0101400 | CYP93G1, OsCYP93G1, OsFNSII, FNSII | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048144 | 7:20,825,365-20,832,892 | + | C1H7g21663 | C2H7g27194 | LOC_Os07g42410 | Os07g0616000 | - | Detail |
| CX7g050288 | 7:20,834,842-20,839,932 | - | C1H7g22153 | C2H7g23964 | LOC_Os07g42420 | Os07g0616200 | - | Detail |
| CX7g047603 | 7:20,846,356-20,853,657 | + | C1H7g08492 | C2H7g14238 | LOC_Os07g42440 | Os07g0616500 | - | Detail |
| CX7g046961 | 7:20,854,585-20,856,429 | - | C1H7g18252 | C2H7g12593 | LOC_Os07g42450 | Os07g0616600 | - | Detail |
| CX7g047791 | 7:20,860,897-20,869,977 | + | C1H11g11076 | - | - | - | - | Detail |
| CX7g050328 | 7:20,873,311-20,873,763 | - | C1H7g15200 | C2H7g18106 | - | - | - | Detail |
| CX7g049372 | 7:20,875,881-20,880,140 | + | C1H7g14836 | C2H7g30322 | LOC_Os07g42490 | Os07g0616800 | Sus3, OsSUS3, Apq1 | Detail |
| CX7g050323 | 7:20,881,866-20,884,464 | + | C1H7g25453 | C2H7g01243 | LOC_Os07g42500 | Os07g0616900 | - | Detail |
| CX7g046895 | 7:20,886,288-20,887,654 | - | C1H7g19704 | C2H7g20929 | LOC_Os07g42510 | Os07g0617000 | - | Detail |
| CX7g048164 | 7:20,892,057-20,892,479 | + | C1H7g13839 | - | LOC_Os07g42520 | Os07g0617100 | - | Detail |
| CX7g048944 | 7:20,895,891-20,896,457 | + | C1H7g13816 | - | LOC_Os07g42570 | Os07g0617500 | - | Detail |
| CX7g046704 | 7:20,908,275-20,909,582 | - | - | - | - | - | - | Detail |
| CX7g049149 | 7:20,913,428-20,917,625 | - | C1H7g31198 | C2H7g27687 | LOC_Os07g42600 | Os07g0617800 | - | Detail |
| CX7g047398 | 7:20,925,440-20,926,462 | - | C1H7g23559 | C2H7g24512 | LOC_Os07g42610 | - | - | Detail |
| CX7g050156 | 7:20,936,349-20,941,868 | + | C1H7g19417 | C2H7g09078 | LOC_Os07g42626 | Os07g0618400 | - | Detail |
| CX7g047535 | 7:20,943,835-20,952,634 | + | C1H7g25200 | C2H7g00142 | LOC_Os07g42632 | Os07g0618600 | - | Detail |
| CX7g046248 | 7:20,954,765-20,956,604 | + | C1H7g24523 | C2H7g13487 | LOC_Os07g42650 | Os07g0618700 | - | Detail |
| CX7g050165 | 7:20,961,720-20,962,058 | + | C1H7g21657 | C2H7g21368 | LOC_Os02g04725 | Os02g0140101 | - | Detail |
| CX7g047644 | 7:20,967,037-20,968,595 | + | C1H7g26532 | C2H7g17445 | LOC_Os07g38120 | Os07g0618800 | - | Detail |
| CX7g047268 | 7:20,972,446-20,972,619 | + | - | - | - | Os02g0188201 | - | Detail |