| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g05639 | 3:30,882,766-30,882,960 | - | C2H3g00892 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C1H3g08848 | 3:30,883,122-30,884,802 | - | C2H3g03004 | CX3g029982 | LOC_Os03g58140 | Os03g0795600 | - | Detail |
| C1H3g16443 | 3:30,886,963-30,889,346 | - | C2H3g02014 | CX3g025433 | LOC_Os03g58150 | Os03g0795800 | - | Detail |
| C1H3g00668 | 3:30,889,611-30,892,801 | + | C2H3g19484 | CX3g029604 | LOC_Os03g58160 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| C1H3g17982 | 3:30,901,091-30,901,796 | + | C2H3g13882 | - | - | Os03g0796000 | - | Detail |
| C1H3g06155 | 3:30,904,898-30,906,624 | + | C2H3g08936 | CX3g029140 | LOC_Os03g58170 | Os03g0744600 | - | Detail |
| C1H3g17510 | 3:30,908,070-30,908,327 | + | - | - | - | - | - | Detail |
| C1H3g22799 | 3:30,925,580-30,926,198 | - | C2H3g19170 | CX3g029920 | LOC_Os03g58180 | Os03g0796301 | - | Detail |
| C1H3g12446 | 3:30,926,884-30,928,201 | - | C2H3g21611 | CX3g028585 | LOC_Os03g58190 | Os03g0796400 | - | Detail |
| C1H3g01827 | 3:30,931,559-30,933,936 | - | C2H3g18356 | CX3g026109 | LOC_Os03g58204 | Os03g0796501 | - | Detail |
| C1H3g17865 | 3:30,940,398-30,940,876 | + | - | - | - | - | - | Detail |
| C1H3g26452 | 3:30,943,982-30,944,992 | + | C2H4g07739 | CX3g025705 | - | Os03g0168800 | - | Detail |
| C1H3g31311 | 3:30,946,560-30,949,428 | + | C2H3g24067 | CX3g026507 | - | - | - | Detail |
| C1H3g10470 | 3:30,963,999-30,966,262 | + | C2H3g06838 | CX3g027699 | LOC_Os03g58230 | Os03g0796600 | OsDUF50605 | Detail |
| C1H3g27596 | 3:30,977,861-30,984,244 | + | C2H3g07985 | CX3g028795 | LOC_Os03g58240 | Os03g0796800 | - | Detail |
| C1H3g15009 | 3:30,984,601-30,988,966 | - | C2H3g15466 | CX3g028970 | LOC_Os03g58250 | Os03g0796900 | REB, OsZIP33, RISBZ2, OsbZIP33 | Detail |
| C1H3g17969 | 3:30,992,592-30,996,090 | - | C2H3g10564 | CX3g025677 | LOC_Os03g58260 | Os03g0797300 | - | Detail |
| C1H3g11238 | 3:30,999,028-31,001,284 | - | C2H3g29626 | CX3g025677 | LOC_Os03g58290 | Os03g0797300 | - | Detail |
| C1H3g02359 | 3:31,005,407-31,009,821 | - | C2H3g15812 | CX3g025677 | LOC_Os03g58300 | Os03g0797300 | - | Detail |
| C1H3g02823 | 3:31,013,247-31,014,934 | - | C2H3g24914 | CX3g025677 | LOC_Os03g58320 | Os03g0797300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048144 | 7:20,825,365-20,832,892 | + | C1H7g21663 | C2H7g27194 | LOC_Os07g42410 | Os07g0616000 | - | Detail |
| CX7g050288 | 7:20,834,842-20,839,932 | - | C1H7g22153 | C2H7g23964 | LOC_Os07g42420 | Os07g0616200 | - | Detail |
| CX7g047603 | 7:20,846,356-20,853,657 | + | C1H7g08492 | C2H7g14238 | LOC_Os07g42440 | Os07g0616500 | - | Detail |
| CX7g046961 | 7:20,854,585-20,856,429 | - | C1H7g18252 | C2H7g12593 | LOC_Os07g42450 | Os07g0616600 | - | Detail |
| CX7g047791 | 7:20,860,897-20,869,977 | + | C1H11g11076 | - | - | - | - | Detail |
| CX7g050328 | 7:20,873,311-20,873,763 | - | C1H7g15200 | C2H7g18106 | - | - | - | Detail |
| CX7g049372 | 7:20,875,881-20,880,140 | + | C1H7g14836 | C2H7g30322 | LOC_Os07g42490 | Os07g0616800 | Sus3, OsSUS3, Apq1 | Detail |
| CX7g050323 | 7:20,881,866-20,884,464 | + | C1H7g25453 | C2H7g01243 | LOC_Os07g42500 | Os07g0616900 | - | Detail |
| CX7g046895 | 7:20,886,288-20,887,654 | - | C1H7g19704 | C2H7g20929 | LOC_Os07g42510 | Os07g0617000 | - | Detail |
| CX7g048164 | 7:20,892,057-20,892,479 | + | C1H7g13839 | - | LOC_Os07g42520 | Os07g0617100 | - | Detail |
| CX7g048944 | 7:20,895,891-20,896,457 | + | C1H7g13816 | - | LOC_Os07g42570 | Os07g0617500 | - | Detail |
| CX7g046704 | 7:20,908,275-20,909,582 | - | - | - | - | - | - | Detail |
| CX7g049149 | 7:20,913,428-20,917,625 | - | C1H7g31198 | C2H7g27687 | LOC_Os07g42600 | Os07g0617800 | - | Detail |
| CX7g047398 | 7:20,925,440-20,926,462 | - | C1H7g23559 | C2H7g24512 | LOC_Os07g42610 | - | - | Detail |
| CX7g050156 | 7:20,936,349-20,941,868 | + | C1H7g19417 | C2H7g09078 | LOC_Os07g42626 | Os07g0618400 | - | Detail |
| CX7g047535 | 7:20,943,835-20,952,634 | + | C1H7g25200 | C2H7g00142 | LOC_Os07g42632 | Os07g0618600 | - | Detail |
| CX7g046248 | 7:20,954,765-20,956,604 | + | C1H7g24523 | C2H7g13487 | LOC_Os07g42650 | Os07g0618700 | - | Detail |
| CX7g050165 | 7:20,961,720-20,962,058 | + | C1H7g21657 | C2H7g21368 | LOC_Os02g04725 | Os02g0140101 | - | Detail |
| CX7g047644 | 7:20,967,037-20,968,595 | + | C1H7g26532 | C2H7g17445 | LOC_Os07g38120 | Os07g0618800 | - | Detail |
| CX7g047268 | 7:20,972,446-20,972,619 | + | - | - | - | Os02g0188201 | - | Detail |