| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g19241 | 11:3,507,960-3,512,265 | + | C2H11g04878 | CX11g014057 | LOC_Os11g08100 | Os11g0183900 | - | Detail |
| C1H11g29158 | 11:3,516,036-3,516,833 | + | - | - | - | Os11g0184100 | - | Detail |
| C1H11g30718 | 11:3,521,013-3,522,019 | + | C2H11g19537 | - | LOC_Os11g08120 | Os11g0184300 | - | Detail |
| C1H11g24574 | 11:3,524,850-3,525,511 | + | C2H11g08483 | CX9g055632 | LOC_Os09g31430 | Os11g0184300 | - | Detail |
| C1H11g21737 | 11:3,525,578-3,526,383 | + | C2H11g15003 | CX11g013993 | LOC_Os11g08160 | Os11g0184300 | - | Detail |
| C1H11g22341 | 11:3,530,988-3,536,589 | + | C2H11g02113 | CX11g014057 | LOC_Os11g08190 | Os11g0184600 | - | Detail |
| C1H11g14966 | 11:3,541,222-3,541,640 | + | C2H11g09425 | - | LOC_Os11g08180 | Os11g0184600 | - | Detail |
| C1H11g29947 | 11:3,542,233-3,542,923 | + | C2H11g25637 | - | LOC_Os11g08190 | Os11g0184600 | - | Detail |
| C1H11g30694 | 11:3,545,393-3,548,317 | + | C2H11g25637 | - | LOC_Os11g08190 | Os11g0183900 | - | Detail |
| C1H11g25147 | 11:3,550,336-3,552,402 | + | C2H11g25637 | CX11g014057 | LOC_Os11g08200 | Os11g0184800 | OsAsp1 | Detail |
| C1H11g09597 | 11:3,554,634-3,556,836 | - | C2H11g02712 | CX11g013912 | LOC_Os11g08210 | Os11g0184900 | NAC5, OsNAC5, NAC71, ONAC071, ONAC009, ONAC9, ONAC020, ONAC20, OnNAC5*, OnNAC5, OsNAC5/ONAC009 | Detail |
| C1H11g06049 | 11:3,567,206-3,568,194 | + | C2H11g30229 | CX11g014413 | LOC_Os11g08220 | Os11g0185100 | - | Detail |
| C1H11g16668 | 11:3,569,196-3,569,507 | + | C2H11g30229 | CX11g010990 | LOC_Os11g08220 | Os11g0185100 | - | Detail |
| C1H11g22894 | 11:3,633,288-3,638,155 | + | C2H11g18389 | CX11g013131 | LOC_Os11g08300 | Os11g0186200 | - | Detail |
| C1H11g28283 | 11:3,639,438-3,642,896 | + | C2H11g28689 | CX11g014402 | LOC_Os11g08314 | Os11g0186300 | - | Detail |
| C1H11g04327 | 11:3,643,665-3,644,999 | + | C2H11g07463 | CX11g011762 | LOC_Os11g08314 | Os11g0186300 | - | Detail |
| C1H11g17958 | 11:3,645,662-3,655,613 | - | C2H11g08181 | CX11g012890 | LOC_Os11g08330 | Os11g0186400 | OsPolδ1 | Detail |
| C1H11g07924 | 11:3,660,820-3,661,307 | - | C2H11g08701 | CX11g011992 | - | - | - | Detail |
| C1H11g02795 | 11:3,665,691-3,667,687 | + | C2H11g25550 | CX11g012905 | LOC_Os11g08340 | Os11g0186500 | - | Detail |
| C1H11g17459 | 11:3,685,165-3,686,454 | + | C2H12g10711 | CX11g010865 | LOC_Os11g08370 | Os11g0186800 | OsPHT4;6-1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048144 | 7:20,825,365-20,832,892 | + | C1H7g21663 | C2H7g27194 | LOC_Os07g42410 | Os07g0616000 | - | Detail |
| CX7g050288 | 7:20,834,842-20,839,932 | - | C1H7g22153 | C2H7g23964 | LOC_Os07g42420 | Os07g0616200 | - | Detail |
| CX7g047603 | 7:20,846,356-20,853,657 | + | C1H7g08492 | C2H7g14238 | LOC_Os07g42440 | Os07g0616500 | - | Detail |
| CX7g046961 | 7:20,854,585-20,856,429 | - | C1H7g18252 | C2H7g12593 | LOC_Os07g42450 | Os07g0616600 | - | Detail |
| CX7g047791 | 7:20,860,897-20,869,977 | + | C1H11g11076 | - | - | - | - | Detail |
| CX7g050328 | 7:20,873,311-20,873,763 | - | C1H7g15200 | C2H7g18106 | - | - | - | Detail |
| CX7g049372 | 7:20,875,881-20,880,140 | + | C1H7g14836 | C2H7g30322 | LOC_Os07g42490 | Os07g0616800 | Sus3, OsSUS3, Apq1 | Detail |
| CX7g050323 | 7:20,881,866-20,884,464 | + | C1H7g25453 | C2H7g01243 | LOC_Os07g42500 | Os07g0616900 | - | Detail |
| CX7g046895 | 7:20,886,288-20,887,654 | - | C1H7g19704 | C2H7g20929 | LOC_Os07g42510 | Os07g0617000 | - | Detail |
| CX7g048164 | 7:20,892,057-20,892,479 | + | C1H7g13839 | - | LOC_Os07g42520 | Os07g0617100 | - | Detail |
| CX7g048944 | 7:20,895,891-20,896,457 | + | C1H7g13816 | - | LOC_Os07g42570 | Os07g0617500 | - | Detail |
| CX7g046704 | 7:20,908,275-20,909,582 | - | - | - | - | - | - | Detail |
| CX7g049149 | 7:20,913,428-20,917,625 | - | C1H7g31198 | C2H7g27687 | LOC_Os07g42600 | Os07g0617800 | - | Detail |
| CX7g047398 | 7:20,925,440-20,926,462 | - | C1H7g23559 | C2H7g24512 | LOC_Os07g42610 | - | - | Detail |
| CX7g050156 | 7:20,936,349-20,941,868 | + | C1H7g19417 | C2H7g09078 | LOC_Os07g42626 | Os07g0618400 | - | Detail |
| CX7g047535 | 7:20,943,835-20,952,634 | + | C1H7g25200 | C2H7g00142 | LOC_Os07g42632 | Os07g0618600 | - | Detail |
| CX7g046248 | 7:20,954,765-20,956,604 | + | C1H7g24523 | C2H7g13487 | LOC_Os07g42650 | Os07g0618700 | - | Detail |
| CX7g050165 | 7:20,961,720-20,962,058 | + | C1H7g21657 | C2H7g21368 | LOC_Os02g04725 | Os02g0140101 | - | Detail |
| CX7g047644 | 7:20,967,037-20,968,595 | + | C1H7g26532 | C2H7g17445 | LOC_Os07g38120 | Os07g0618800 | - | Detail |
| CX7g047268 | 7:20,972,446-20,972,619 | + | - | - | - | Os02g0188201 | - | Detail |