| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20320 | 4:4,580,684-4,595,119 | - | C1H4g19750 | CX4g036116 | - | Os04g0177600 | - | Detail |
| C2H4g06763 | 4:4,603,488-4,609,315 | + | C1H4g08248 | CX4g034737 | LOC_Os04g10060 | Os04g0179700 | OsKS4, OsKSL4, OsDTS2, OsKSL1 | Detail |
| C2H4g26362 | 4:4,610,311-4,613,778 | + | - | - | - | - | - | Detail |
| C2H4g10076 | 4:4,631,228-4,632,183 | + | C1H4g01524 | CX4g035289 | LOC_Os04g10010 | Os04g0179200 | - | Detail |
| C2H4g09020 | 4:4,636,815-4,638,002 | + | C1H4g30336 | CX4g033846 | LOC_Os04g10000 | Os04g0179100 | - | Detail |
| C2H4g20823 | 4:4,651,384-4,656,607 | - | C1H4g10301 | CX4g033652 | LOC_Os04g11850 | Os04g0206200 | - | Detail |
| C2H4g20465 | 4:4,684,456-4,684,847 | - | C1H3g15946 | CX4g035261 | - | - | - | Detail |
| C2H4g09237 | 4:4,691,216-4,693,185 | + | C1H4g28574 | CX4g036126 | LOC_Os04g09920 | Os04g0178400 | CYP99A3 | Detail |
| C2H4g23937 | 4:4,702,491-4,703,137 | + | - | CX4g036600 | LOC_Os10g11240 | Os08g0271600 | - | Detail |
| C2H4g23853 | 4:4,705,215-4,709,270 | - | C1H4g09839 | CX4g032774 | LOC_Os04g09900 | Os04g0178300 | OsCPS4, Os-CPS4, OsCyc1, OsCPSsyn | Detail |
| C2H4g26728 | 4:4,710,898-4,711,756 | - | C1H4g12052 | CX4g032774 | LOC_Os04g09900 | Os04g0611800 | OsKSL2 | Detail |
| C2H4g06078 | 4:4,732,665-4,734,362 | + | C1H4g04065 | CX4g034919 | LOC_Os04g10160 | Os04g0180400 | - | Detail |
| C2H4g21850 | 4:4,759,078-4,761,519 | - | C1H4g03949 | - | LOC_Os04g10210 | - | - | Detail |
| C2H4g14385 | 4:4,767,542-4,770,581 | - | C1H4g10325 | CX4g036149 | LOC_Os04g10240 | Os04g0181100 | - | Detail |
| C2H4g14846 | 4:4,779,345-4,782,119 | - | C1H4g30056 | CX4g035099 | LOC_Os04g10260 | Os04g0181300 | - | Detail |
| C2H4g02690 | 4:4,784,623-4,786,141 | + | C1H4g22965 | CX4g035182 | LOC_Os04g10350 | Os04g0182200 | - | Detail |
| C2H4g06301 | 4:4,797,896-4,798,687 | + | - | - | - | - | - | Detail |
| C2H4g27360 | 4:4,806,675-4,808,996 | + | C1H4g24802 | CX4g035182 | LOC_Os04g10350 | Os04g0182200 | - | Detail |
| C2H4g25006 | 4:4,828,000-4,849,200 | + | C1H4g12559 | CX4g032156 | LOC_Os04g10380 | Os04g0182650 | - | Detail |
| C2H4g08700 | 4:4,856,672-4,859,865 | - | C1H4g07822 | CX4g034981 | LOC_Os04g10400 | Os04g0182800 | ETFβ | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046325 | 7:20,696,956-20,697,396 | - | C1H7g19367 | - | LOC_Os07g42170 | Os07g0613200 | - | Detail |
| CX7g046449 | 7:20,699,587-20,706,816 | + | C1H7g30387 | C2H7g21848 | LOC_Os07g42180 | Os07g0613300 | - | Detail |
| CX7g048911 | 7:20,715,344-20,720,699 | + | C1H7g20365 | C2H7g07716 | LOC_Os07g42200 | Os07g0613500 | - | Detail |
| CX7g048222 | 7:20,726,359-20,726,850 | - | C1H7g26634 | - | LOC_Os07g42220 | Os07g0613800 | - | Detail |
| CX7g047018 | 7:20,729,527-20,731,724 | + | C1H7g31882 | C2H7g21073 | LOC_Os07g42250 | Os07g0614000 | - | Detail |
| CX7g048519 | 7:20,732,951-20,735,585 | - | C1H7g24565 | C2H7g29273 | LOC_Os07g42260 | Os07g0614100 | OsPAA2 | Detail |
| CX7g046181 | 7:20,741,352-20,741,813 | + | - | - | - | - | - | Detail |
| CX7g049610 | 7:20,741,904-20,742,218 | + | C1H7g03963 | C2H7g29174 | LOC_Os07g36220 | Os07g0543700 | - | Detail |
| CX7g046984 | 7:20,744,454-20,751,304 | + | C1H7g14952 | C2H7g29624 | LOC_Os07g42280 | Os07g0614300 | - | Detail |
| CX7g049878 | 7:20,755,461-20,757,022 | + | C1H7g02262 | C2H7g10167 | LOC_Os07g42290 | Os07g0614400 | qSOR1, DRL1 | Detail |
| CX7g047244 | 7:20,760,040-20,762,668 | - | C1H7g26650 | C2H7g27930 | LOC_Os07g42300 | Os07g0614500 | - | Detail |
| CX7g050298 | 7:20,767,634-20,770,300 | + | C1H7g24146 | C2H7g14882 | LOC_Os07g42310 | Os07g0614600 | - | Detail |
| CX7g046171 | 7:20,774,291-20,775,090 | - | C1H7g30128 | C2H3g28132 | - | Os07g0614700 | OsSPX6, SPX6 | Detail |
| CX7g050390 | 7:20,775,850-20,776,059 | + | C1H1g14515 | C2H1g23792 | - | - | - | Detail |
| CX7g048465 | 7:20,780,586-20,782,763 | + | C1H7g21839 | C2H7g12731 | LOC_Os07g42354 | Os07g0615000 | - | Detail |
| CX7g049283 | 7:20,794,632-20,796,242 | + | C1H7g22588 | C2H7g25347 | LOC_Os07g42370 | Os07g0615200 | OsJAZ7 | Detail |
| CX7g047051 | 7:20,803,105-20,807,650 | + | C1H7g21897 | C2H7g06495 | LOC_Os07g42380 | Os07g0615400 | - | Detail |
| CX7g046608 | 7:20,808,876-20,809,614 | - | C1H7g24184 | C2H7g18721 | LOC_Os07g42390 | Os07g0615500 | - | Detail |
| CX7g048008 | 7:20,812,733-20,815,229 | - | C1H7g12920 | C2H7g04089 | LOC_Os07g42395 | Os07g0615800 | - | Detail |
| CX7g049223 | 7:20,815,272-20,818,692 | + | C1H7g15813 | C2H7g13124 | LOC_Os07g42400 | Os07g0615900 | OsGATA23, OsGATA23b | Detail |