| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08811 | 1:22,727,992-22,729,387 | + | C2H1g24347 | CX1g000338 | LOC_Os01g44090 | Os01g0631500 | - | Detail |
| C1H1g07009 | 1:22,749,888-22,754,361 | + | C2H1g14152 | CX1g001009 | LOC_Os01g44110 | Os01g0631700 | - | Detail |
| C1H1g05320 | 1:22,758,481-22,764,326 | + | C2H1g16370 | CX1g000935 | LOC_Os01g44130 | Os01g0631900 | - | Detail |
| C1H1g12869 | 1:22,778,149-22,779,192 | + | C2H1g06740 | - | - | - | - | Detail |
| C1H1g13707 | 1:22,789,394-22,789,909 | - | C2H1g03548 | - | LOC_Os01g44210 | Os01g0633000 | - | Detail |
| C1H1g09519 | 1:22,799,911-22,808,100 | + | C2H1g23506 | CX1g000578 | LOC_Os01g44220 | Os01g0633100 | AGPL2, OsAGPL2, osagpl2, APL2, OsAPL2, AGPiso, sh2, Sh2 | Detail |
| C1H1g25629 | 1:22,809,738-22,813,559 | + | C2H1g25610 | CX1g004196 | LOC_Os01g44230 | Os01g0633200 | - | Detail |
| C1H1g17417 | 1:22,815,019-22,817,459 | + | C2H1g21259 | CX1g001984 | LOC_Os01g44250 | Os01g0633400 | - | Detail |
| C1H1g26792 | 1:22,822,413-22,824,342 | + | C2H1g13154 | CX1g005798 | LOC_Os01g44260 | Os01g0633500 | Rd, DFR | Detail |
| C1H1g26567 | 1:22,827,646-22,835,145 | - | C2H1g30459 | CX1g002472 | LOC_Os01g44310 | Os01g0634300 | - | Detail |
| C1H1g01839 | 1:22,861,358-22,863,345 | - | C2H1g20909 | CX1g002072 | LOC_Os01g44330 | Os01g0634500 | - | Detail |
| C1H1g04340 | 1:22,864,879-22,866,443 | - | C2H1g10174 | CX1g000429 | LOC_Os01g44340 | Os01g0634600 | - | Detail |
| C1H1g02990 | 1:22,868,213-22,870,234 | + | C2H1g02801 | CX1g003750 | LOC_Os01g44360 | Os01g0634900 | - | Detail |
| C1H1g03527 | 1:22,887,199-22,890,609 | + | C2H1g14029 | CX1g001073 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C1H1g07657 | 1:22,892,905-22,894,371 | + | C2H1g03825 | CX8g052292 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C1H1g22176 | 1:22,898,659-22,904,337 | - | C2H1g05065 | CX1g000646 | LOC_Os01g44430 | Os01g0635600 | - | Detail |
| C1H1g27414 | 1:22,918,386-22,920,878 | - | C2H1g18946 | CX1g003935 | LOC_Os01g44960 | Os01g0636400 | - | Detail |
| C1H1g00331 | 1:22,930,406-22,934,280 | + | C2H1g07403 | CX1g001605 | LOC_Os01g44970 | Os01g0636500 | - | Detail |
| C1H1g13180 | 1:22,936,336-22,939,660 | - | C2H1g22263 | CX1g007252 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| C1H1g21245 | 1:22,943,227-22,944,039 | + | C2H1g15078 | CX1g000311 | LOC_Os01g45090 | Os01g0637800 | OsMYB305 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046325 | 7:20,696,956-20,697,396 | - | C1H7g19367 | - | LOC_Os07g42170 | Os07g0613200 | - | Detail |
| CX7g046449 | 7:20,699,587-20,706,816 | + | C1H7g30387 | C2H7g21848 | LOC_Os07g42180 | Os07g0613300 | - | Detail |
| CX7g048911 | 7:20,715,344-20,720,699 | + | C1H7g20365 | C2H7g07716 | LOC_Os07g42200 | Os07g0613500 | - | Detail |
| CX7g048222 | 7:20,726,359-20,726,850 | - | C1H7g26634 | - | LOC_Os07g42220 | Os07g0613800 | - | Detail |
| CX7g047018 | 7:20,729,527-20,731,724 | + | C1H7g31882 | C2H7g21073 | LOC_Os07g42250 | Os07g0614000 | - | Detail |
| CX7g048519 | 7:20,732,951-20,735,585 | - | C1H7g24565 | C2H7g29273 | LOC_Os07g42260 | Os07g0614100 | OsPAA2 | Detail |
| CX7g046181 | 7:20,741,352-20,741,813 | + | - | - | - | - | - | Detail |
| CX7g049610 | 7:20,741,904-20,742,218 | + | C1H7g03963 | C2H7g29174 | LOC_Os07g36220 | Os07g0543700 | - | Detail |
| CX7g046984 | 7:20,744,454-20,751,304 | + | C1H7g14952 | C2H7g29624 | LOC_Os07g42280 | Os07g0614300 | - | Detail |
| CX7g049878 | 7:20,755,461-20,757,022 | + | C1H7g02262 | C2H7g10167 | LOC_Os07g42290 | Os07g0614400 | qSOR1, DRL1 | Detail |
| CX7g047244 | 7:20,760,040-20,762,668 | - | C1H7g26650 | C2H7g27930 | LOC_Os07g42300 | Os07g0614500 | - | Detail |
| CX7g050298 | 7:20,767,634-20,770,300 | + | C1H7g24146 | C2H7g14882 | LOC_Os07g42310 | Os07g0614600 | - | Detail |
| CX7g046171 | 7:20,774,291-20,775,090 | - | C1H7g30128 | C2H3g28132 | - | Os07g0614700 | OsSPX6, SPX6 | Detail |
| CX7g050390 | 7:20,775,850-20,776,059 | + | C1H1g14515 | C2H1g23792 | - | - | - | Detail |
| CX7g048465 | 7:20,780,586-20,782,763 | + | C1H7g21839 | C2H7g12731 | LOC_Os07g42354 | Os07g0615000 | - | Detail |
| CX7g049283 | 7:20,794,632-20,796,242 | + | C1H7g22588 | C2H7g25347 | LOC_Os07g42370 | Os07g0615200 | OsJAZ7 | Detail |
| CX7g047051 | 7:20,803,105-20,807,650 | + | C1H7g21897 | C2H7g06495 | LOC_Os07g42380 | Os07g0615400 | - | Detail |
| CX7g046608 | 7:20,808,876-20,809,614 | - | C1H7g24184 | C2H7g18721 | LOC_Os07g42390 | Os07g0615500 | - | Detail |
| CX7g048008 | 7:20,812,733-20,815,229 | - | C1H7g12920 | C2H7g04089 | LOC_Os07g42395 | Os07g0615800 | - | Detail |
| CX7g049223 | 7:20,815,272-20,818,692 | + | C1H7g15813 | C2H7g13124 | LOC_Os07g42400 | Os07g0615900 | OsGATA23, OsGATA23b | Detail |