| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g15942 | 5:14,806,407-14,808,137 | + | C2H5g14904 | CX5g038438 | LOC_Os05g31420 | Os05g0378500 | Gnd5 | Detail |
| C1H5g26766 | 5:14,841,025-14,841,713 | - | C2H5g05514 | CX5g037505 | LOC_Os05g31470 | - | - | Detail |
| C1H5g21416 | 5:14,847,264-14,852,436 | - | C2H5g07919 | CX5g040361 | LOC_Os05g31480 | Os05g0378800 | - | Detail |
| C1H5g03148 | 5:14,853,191-14,857,977 | - | C2H5g27417 | CX5g038969 | LOC_Os05g31490 | Os05g0378900 | - | Detail |
| C1H5g12936 | 5:14,863,567-14,866,978 | - | - | - | LOC_Os05g31520 | - | - | Detail |
| C1H5g20720 | 5:14,867,847-14,869,818 | - | C2H5g25052 | - | - | - | - | Detail |
| C1H5g28359 | 5:14,872,112-14,881,346 | + | C2H5g19061 | CX5g039321 | LOC_Os05g31530 | Os05g0379500 | - | Detail |
| C1H5g13126 | 5:14,882,877-14,883,458 | - | - | - | - | - | - | Detail |
| C1H5g09848 | 5:14,883,520-14,884,320 | - | - | - | - | - | - | Detail |
| C1H5g28629 | 5:14,884,371-14,884,991 | - | - | - | - | - | - | Detail |
| C1H5g31239 | 5:14,885,493-14,887,155 | - | - | - | - | Os05g0380850 | - | Detail |
| C1H5g05054 | 5:14,891,582-14,892,178 | - | C2H5g18251 | CX5g037649 | LOC_Os05g31620 | Os05g0380900 | - | Detail |
| C1H5g03678 | 5:14,909,056-14,909,574 | - | C2H5g02851 | CX5g036933 | LOC_Os05g31670 | Os05g0381400 | AWPM-19, PM19, OsPM1, OsPM19L1 | Detail |
| C1H5g22192 | 5:14,912,709-14,916,753 | + | C2H5g00812 | CX5g040874 | LOC_Os05g31680 | Os05g0381500 | - | Detail |
| C1H5g26855 | 5:14,928,977-14,932,252 | + | - | CX5g041023 | LOC_Os05g31690 | Os05g0381700 | - | Detail |
| C1H5g18693 | 5:14,960,958-14,963,095 | + | C2H5g07422 | CX5g038575 | LOC_Os05g31710 | Os05g0381900 | - | Detail |
| C1H5g25084 | 5:14,975,576-14,978,892 | + | C2H5g04833 | CX5g040022 | LOC_Os05g31720 | Os05g0382000 | - | Detail |
| C1H5g14307 | 5:14,983,196-14,987,606 | - | C2H5g08328 | CX5g037534 | LOC_Os05g31730 | Os05g0382200 | - | Detail |
| C1H5g04280 | 5:14,993,709-14,995,280 | + | C2H5g19880 | CX5g036798 | LOC_Os05g31740 | Os05g0382500 | CYP94E3, OsCYP94E3 | Detail |
| C1H5g01406 | 5:15,003,520-15,005,185 | - | C2H5g19685 | CX5g040387 | LOC_Os05g31750 | Os05g0382600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g050225 | 7:20,341,897-20,345,765 | + | C1H7g11179 | C2H7g17393 | LOC_Os07g41400 | Os07g0605350 | - | Detail |
| CX7g048660 | 7:20,346,548-20,346,760 | - | - | - | - | - | - | Detail |
| CX7g047433 | 7:20,352,611-20,352,952 | + | C1H7g10268 | C2H7g17393 | LOC_Os07g41410 | Os07g0605400 | - | Detail |
| CX7g047919 | 7:20,355,852-20,356,889 | - | C1H7g18805 | C2H7g17255 | LOC_Os07g41460 | Os07g0605800 | - | Detail |
| CX7g048068 | 7:20,362,938-20,370,429 | + | C1H7g26886 | C2H7g18823 | LOC_Os07g41570 | Os07g0606500 | - | Detail |
| CX7g050367 | 7:20,376,524-20,377,081 | + | - | - | - | - | - | Detail |
| CX7g046308 | 7:20,391,692-20,392,690 | + | C1H7g29000 | C2H7g13862 | LOC_Os07g41590 | Os07g0606800 | - | Detail |
| CX7g048779 | 7:20,394,033-20,394,197 | + | - | - | - | - | - | Detail |
| CX7g047586 | 7:20,394,889-20,397,474 | - | C1H7g14018 | C2H7g16570 | LOC_Os07g41600 | Os07g0606900 | - | Detail |
| CX7g049221 | 7:20,425,702-20,426,301 | - | C1H7g10312 | C2H7g18151 | LOC_Os07g41630 | Os07g0607200 | - | Detail |
| CX7g048134 | 7:20,428,179-20,431,578 | + | C1H7g00238 | C2H7g13245 | LOC_Os07g41640 | Os07g0607300 | - | Detail |
| CX7g046476 | 7:20,432,650-20,435,400 | - | C1H7g08218 | C2H7g18323 | LOC_Os07g41650 | Os07g0607400 | - | Detail |
| CX7g047642 | 7:20,438,398-20,439,570 | - | C1H7g23295 | C2H7g10688 | LOC_Os07g41660 | Os07g0607500 | - | Detail |
| CX7g049175 | 7:20,442,514-20,443,588 | + | C1H7g06818 | C2H7g20778 | LOC_Os07g41680 | Os07g0607700 | - | Detail |
| CX7g050268 | 7:20,452,682-20,455,802 | + | C1H7g03509 | C2H7g06182 | LOC_Os07g41694 | Os07g0607800 | - | Detail |
| CX7g048714 | 7:20,458,990-20,460,728 | + | C1H7g10145 | C2H7g20380 | - | - | - | Detail |
| CX7g048960 | 7:20,462,358-20,464,427 | + | C1H7g08628 | C2H7g07775 | LOC_Os07g41710 | Os07g0608100 | - | Detail |
| CX7g048103 | 7:20,465,297-20,467,976 | - | C1H7g26187 | C2H7g06133 | LOC_Os07g41720 | Os07g0608200 | OsNF-YA6, HAP2G | Detail |
| CX7g045990 | 7:20,476,292-20,476,741 | - | - | - | - | - | - | Detail |
| CX7g047265 | 7:20,476,328-20,480,649 | + | C1H7g09112 | C2H7g06353 | LOC_Os07g41730 | Os07g0608300 | - | Detail |