| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g07794 | 5:14,097,460-14,098,998 | - | C1H5g08137 | CX5g036996 | LOC_Os05g28830 | Os05g0356700 | - | Detail |
| C2H5g24764 | 5:14,127,122-14,133,294 | + | C1H5g31648 | CX5g040608 | LOC_Os05g28860 | Os05g0357100 | - | Detail |
| C2H5g24182 | 5:14,136,743-14,140,694 | + | C1H5g23359 | CX5g039247 | LOC_Os05g28870 | Os05g0357200 | - | Detail |
| C2H5g04780 | 5:14,149,671-14,150,061 | + | C1H5g03054 | - | LOC_Os05g28930 | Os05g0357500 | - | Detail |
| C2H5g05040 | 5:14,154,028-14,155,668 | + | C1H5g02870 | CX5g039137 | LOC_Os05g28930 | Os05g0106200 | - | Detail |
| C2H5g26423 | 5:14,160,154-14,166,873 | + | C1H5g10874 | CX5g039940 | LOC_Os05g28940 | Os05g0357600 | - | Detail |
| C2H5g16492 | 5:14,167,695-14,170,903 | + | C1H5g28225 | CX5g039406 | LOC_Os05g28950 | Os05g0357700 | - | Detail |
| C2H5g23485 | 5:14,170,460-14,188,719 | - | C1H5g03244 | CX5g039295 | LOC_Os05g28960 | Os05g0357800 | - | Detail |
| C2H5g02423 | 5:14,192,070-14,197,147 | - | C1H5g07764 | CX5g040983 | LOC_Os05g28980 | Os05g0562200 | - | Detail |
| C2H5g18517 | 5:14,208,089-14,213,130 | - | C1H5g06850 | CX5g039449 | LOC_Os05g29010 | Os05g0358200 | - | Detail |
| C2H5g01658 | 5:14,215,340-14,218,963 | + | C1H5g03489 | - | - | - | - | Detail |
| C2H5g18308 | 5:14,219,465-14,222,229 | + | C1H5g29355 | CX5g040880 | LOC_Os05g29020 | Os05g0358400 | - | Detail |
| C2H5g24350 | 5:14,222,448-14,226,881 | - | C1H5g26207 | CX5g038320 | LOC_Os05g29030 | Os05g0358500 | - | Detail |
| C2H5g09784 | 5:14,268,963-14,279,710 | - | C1H5g07959 | CX5g036891 | LOC_Os05g29050 | Os05g0358700 | - | Detail |
| C2H5g26181 | 5:14,300,410-14,301,111 | - | C1H5g11715 | CX5g039572 | LOC_Os05g29080 | Os05g0358900 | - | Detail |
| C2H5g26282 | 5:14,304,028-14,308,286 | - | C1H5g02402 | - | LOC_Os05g29090 | Os05g0359000 | - | Detail |
| C2H5g10119 | 5:14,335,374-14,335,982 | + | C1H5g17878 | CX5g037230 | LOC_Os05g29676 | Os05g0360400 | - | Detail |
| C2H5g04934 | 5:14,368,617-14,369,240 | + | C1H5g25908 | CX5g041138 | LOC_Os05g29740 | Os05g0360900 | OsPMEI23 | Detail |
| C2H5g01492 | 5:14,371,579-14,373,332 | + | C1H5g22546 | CX5g040449 | LOC_Os05g29750 | Os05g0361000 | - | Detail |
| C2H5g13846 | 5:14,379,267-14,386,713 | + | C1H5g08636 | CX5g038793 | LOC_Os05g29760 | Os05g0361200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047230 | 7:20,160,808-20,166,638 | + | C1H7g24563 | C2H7g10483 | LOC_Os07g41090 | Os07g0602200 | OsHDA713 | Detail |
| CX7g049494 | 7:20,179,482-20,182,694 | + | C1H7g31048 | C2H7g03119 | LOC_Os07g41140 | Os07g0602700 | - | Detail |
| CX7g047083 | 7:20,186,607-20,188,035 | - | C1H7g01192 | C2H7g09899 | LOC_Os07g41150 | Os07g0602800 | - | Detail |
| CX7g048011 | 7:20,192,539-20,194,510 | - | C1H7g09060 | C2H7g29162 | LOC_Os07g41160 | Os07g0602900 | - | Detail |
| CX7g047715 | 7:20,210,478-20,214,164 | - | C1H7g04088 | C2H7g27298 | LOC_Os07g41180 | Os07g0603100 | - | Detail |
| CX7g048554 | 7:20,215,971-20,217,647 | + | C1H7g00002 | C2H7g15243 | LOC_Os07g41190 | Os07g0603200 | - | Detail |
| CX7g047036 | 7:20,219,746-20,224,516 | - | C1H7g17335 | C2H7g14495 | LOC_Os07g41200 | Os07g0603300 | GL7, GW7, qGW7, qGL7 | Detail |
| CX7g050308 | 7:20,231,262-20,231,507 | - | - | - | - | - | - | Detail |
| CX7g046903 | 7:20,249,316-20,253,002 | + | C1H7g02309 | C2H7g15367 | LOC_Os07g41230 | Os07g0603600 | OsMESL | Detail |
| CX7g047968 | 7:20,263,842-20,265,266 | + | C1H7g22521 | C2H7g23102 | LOC_Os07g41240 | Os07g0603700 | GE1, ge1, ge, CYP78A13, OsCYP78A13, GE, BG2 | Detail |
| CX7g047799 | 7:20,269,057-20,272,272 | + | C1H7g18114 | C2H7g24085 | LOC_Os07g41250 | Os07g0603800 | OsNPF7.1a, OsNPF7.1 | Detail |
| CX7g046521 | 7:20,273,243-20,274,697 | + | C1H7g27139 | C2H7g27266 | LOC_Os07g41260 | Os07g0603900 | - | Detail |
| CX7g047916 | 7:20,283,507-20,286,009 | + | C1H7g22892 | C2H7g11752 | LOC_Os07g41280 | Os07g0604000 | - | Detail |
| CX7g050327 | 7:20,295,742-20,298,921 | + | C1H7g15311 | C2H7g19715 | LOC_Os07g41310 | Os07g0604300 | OsBC1L6 | Detail |
| CX7g048924 | 7:20,299,533-20,302,275 | - | C1H7g09407 | C2H7g04451 | LOC_Os07g41320 | Os07g0604400 | - | Detail |
| CX7g048956 | 7:20,304,007-20,304,240 | - | - | - | - | - | - | Detail |
| CX7g047325 | 7:20,305,967-20,306,485 | - | C1H7g14121 | C2H7g30044 | LOC_Os07g41330 | Os07g0604550 | - | Detail |
| CX7g050196 | 7:20,306,875-20,307,546 | - | C1H7g30183 | C2H7g30044 | LOC_Os07g41330 | Os07g0604500 | - | Detail |
| CX7g046180 | 7:20,317,764-20,320,702 | + | C1H7g04285 | C2H7g30253 | LOC_Os07g41360 | Os07g0604800 | UAM3, OsUAM3 | Detail |
| CX7g048061 | 7:20,332,743-20,340,211 | + | C1H7g19964 | C2H7g00539 | LOC_Os07g41370 | Os07g0605200 | MADS18, OsMADS18, MADS2, OsMADS2, MADS28, OsMADS28, FDRMADS7, OsMADS18/28 | Detail |