| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g30733 | 3:3,265,574-3,267,124 | + | C2H3g06080 | CX3g027561 | LOC_Os03g07330 | Os03g0169300 | - | Detail |
| C1H3g17744 | 3:3,268,862-3,269,633 | - | C2H3g03131 | CX3g029153 | LOC_Os03g07340 | Os03g0169400 | - | Detail |
| C1H3g09565 | 3:3,269,930-3,274,546 | + | C2H3g06080 | CX3g030421 | LOC_Os03g07350 | Os03g0169500 | OsCSLA4 | Detail |
| C1H3g30713 | 3:3,279,687-3,282,410 | + | C2H3g15611 | CX3g029943 | LOC_Os03g07360 | Os03g0169600 | RDD4, OsDof12, Dof12, OsDof-12, OsCDF1, OsCDF1/OsDOF12, OsDOF12, CDF1, DOF12 | Detail |
| C1H3g07573 | 3:3,285,332-3,286,936 | - | C2H3g04475 | CX3g029455 | LOC_Os03g07370 | Os03g0169800 | WSL9 | Detail |
| C1H3g28123 | 3:3,288,651-3,290,857 | - | C2H3g13284 | CX3g026502 | LOC_Os03g07380 | Os03g0169900 | - | Detail |
| C1H3g30140 | 3:3,296,603-3,296,968 | - | C2H3g19051 | CX3g030142 | LOC_Os03g07400 | Os03g0170100 | - | Detail |
| C1H3g19291 | 3:3,300,332-3,303,968 | + | C2H3g20350 | CX3g026147 | LOC_Os03g07420 | Os03g0170300 | - | Detail |
| C1H3g10171 | 3:3,304,680-3,308,519 | - | C2H3g22587 | CX3g030033 | LOC_Os03g07430 | Os03g0170400 | OsRLCK102 | Detail |
| C1H3g24740 | 3:3,313,654-3,314,211 | - | C2H3g17639 | CX3g029150 | LOC_Os03g07440 | Os03g0170500 | - | Detail |
| C1H3g30202 | 3:3,320,822-3,323,552 | - | C2H3g04350 | CX3g026337 | LOC_Os03g07450 | Os03g0170600 | - | Detail |
| C1H3g13830 | 3:3,329,053-3,329,997 | + | C2H3g02647 | CX3g025444 | LOC_Os03g07470 | Os03g0170800 | - | Detail |
| C1H3g13288 | 3:3,332,199-3,338,105 | - | C2H3g25317 | CX3g025078 | LOC_Os03g07480 | Os03g0170900 | - | Detail |
| C1H3g19778 | 3:3,347,153-3,347,814 | - | C2H3g08560 | CX3g027135 | LOC_Os03g07510 | Os03g0171300 | PGL1, ILI6 | Detail |
| C1H3g11183 | 3:3,364,907-3,366,202 | + | C2H3g08984 | CX3g026056 | LOC_Os03g07530 | Os03g0171600 | - | Detail |
| C1H3g20949 | 3:3,376,558-3,377,120 | + | C2H3g13809 | CX3g031164 | LOC_Os03g07540 | Os03g0171700 | OsbHLH153 | Detail |
| C1H3g01760 | 3:3,385,229-3,389,074 | + | C2H3g25444 | CX3g025564 | LOC_Os03g07570 | Os03g0171900 | - | Detail |
| C1H3g16730 | 3:3,390,361-3,395,122 | + | C2H3g13937 | CX3g028125 | LOC_Os03g07580 | Os03g0172000 | - | Detail |
| C1H3g20330 | 3:3,399,164-3,399,409 | + | C2H3g23028 | CX3g030853 | LOC_Os03g07590 | Os03g0172100 | - | Detail |
| C1H3g07122 | 3:3,400,003-3,403,602 | - | C2H3g09147 | CX3g029415 | LOC_Os03g07600 | Os03g0172200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047230 | 7:20,160,808-20,166,638 | + | C1H7g24563 | C2H7g10483 | LOC_Os07g41090 | Os07g0602200 | OsHDA713 | Detail |
| CX7g049494 | 7:20,179,482-20,182,694 | + | C1H7g31048 | C2H7g03119 | LOC_Os07g41140 | Os07g0602700 | - | Detail |
| CX7g047083 | 7:20,186,607-20,188,035 | - | C1H7g01192 | C2H7g09899 | LOC_Os07g41150 | Os07g0602800 | - | Detail |
| CX7g048011 | 7:20,192,539-20,194,510 | - | C1H7g09060 | C2H7g29162 | LOC_Os07g41160 | Os07g0602900 | - | Detail |
| CX7g047715 | 7:20,210,478-20,214,164 | - | C1H7g04088 | C2H7g27298 | LOC_Os07g41180 | Os07g0603100 | - | Detail |
| CX7g048554 | 7:20,215,971-20,217,647 | + | C1H7g00002 | C2H7g15243 | LOC_Os07g41190 | Os07g0603200 | - | Detail |
| CX7g047036 | 7:20,219,746-20,224,516 | - | C1H7g17335 | C2H7g14495 | LOC_Os07g41200 | Os07g0603300 | GL7, GW7, qGW7, qGL7 | Detail |
| CX7g050308 | 7:20,231,262-20,231,507 | - | - | - | - | - | - | Detail |
| CX7g046903 | 7:20,249,316-20,253,002 | + | C1H7g02309 | C2H7g15367 | LOC_Os07g41230 | Os07g0603600 | OsMESL | Detail |
| CX7g047968 | 7:20,263,842-20,265,266 | + | C1H7g22521 | C2H7g23102 | LOC_Os07g41240 | Os07g0603700 | GE1, ge1, ge, CYP78A13, OsCYP78A13, GE, BG2 | Detail |
| CX7g047799 | 7:20,269,057-20,272,272 | + | C1H7g18114 | C2H7g24085 | LOC_Os07g41250 | Os07g0603800 | OsNPF7.1a, OsNPF7.1 | Detail |
| CX7g046521 | 7:20,273,243-20,274,697 | + | C1H7g27139 | C2H7g27266 | LOC_Os07g41260 | Os07g0603900 | - | Detail |
| CX7g047916 | 7:20,283,507-20,286,009 | + | C1H7g22892 | C2H7g11752 | LOC_Os07g41280 | Os07g0604000 | - | Detail |
| CX7g050327 | 7:20,295,742-20,298,921 | + | C1H7g15311 | C2H7g19715 | LOC_Os07g41310 | Os07g0604300 | OsBC1L6 | Detail |
| CX7g048924 | 7:20,299,533-20,302,275 | - | C1H7g09407 | C2H7g04451 | LOC_Os07g41320 | Os07g0604400 | - | Detail |
| CX7g048956 | 7:20,304,007-20,304,240 | - | - | - | - | - | - | Detail |
| CX7g047325 | 7:20,305,967-20,306,485 | - | C1H7g14121 | C2H7g30044 | LOC_Os07g41330 | Os07g0604550 | - | Detail |
| CX7g050196 | 7:20,306,875-20,307,546 | - | C1H7g30183 | C2H7g30044 | LOC_Os07g41330 | Os07g0604500 | - | Detail |
| CX7g046180 | 7:20,317,764-20,320,702 | + | C1H7g04285 | C2H7g30253 | LOC_Os07g41360 | Os07g0604800 | UAM3, OsUAM3 | Detail |
| CX7g048061 | 7:20,332,743-20,340,211 | + | C1H7g19964 | C2H7g00539 | LOC_Os07g41370 | Os07g0605200 | MADS18, OsMADS18, MADS2, OsMADS2, MADS28, OsMADS28, FDRMADS7, OsMADS18/28 | Detail |