| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g25248 | 3:29,365,346-29,367,619 | - | C1H3g10204 | CX3g027698 | LOC_Os03g56370 | Os03g0775000 | - | Detail |
| C2H3g05048 | 3:29,371,454-29,375,985 | + | C1H3g14191 | CX3g026008 | LOC_Os03g56380 | Os03g0775200 | - | Detail |
| C2H3g23503 | 3:29,374,453-29,374,884 | - | - | - | - | Os03g0775250 | - | Detail |
| C2H3g23811 | 3:29,376,600-29,380,081 | + | C1H3g27485 | CX3g026938 | LOC_Os03g56390 | Os03g0775300 | - | Detail |
| C2H3g12716 | 3:29,380,413-29,382,824 | - | C1H3g13212 | CX3g030898 | LOC_Os03g56400 | Os03g0775400 | - | Detail |
| C2H3g27854 | 3:29,383,365-29,386,902 | + | C1H3g05680 | CX3g030889 | LOC_Os03g56410 | Os03g0775500 | - | Detail |
| C2H3g25642 | 3:29,395,401-29,398,122 | + | C1H3g30894 | CX3g030664 | LOC_Os03g56420 | Os03g0775600 | - | Detail |
| C2H3g18914 | 3:29,399,385-29,403,005 | + | C1H3g19822 | CX3g029071 | LOC_Os03g56430 | Os03g0775700 | - | Detail |
| C2H3g00007 | 3:29,412,826-29,414,241 | + | C1H3g04719 | CX3g026587 | LOC_Os03g56450 | Os03g0775900 | - | Detail |
| C2H3g28249 | 3:29,418,074-29,425,033 | + | C1H3g16991 | CX3g026064 | LOC_Os03g56460 | Os03g0776000 | - | Detail |
| C2H3g15730 | 3:29,425,373-29,427,891 | - | C1H3g04454 | CX3g028659 | LOC_Os03g56470 | Os03g0776100 | OsPERK4 | Detail |
| C2H3g19254 | 3:29,447,198-29,449,236 | + | C1H3g02970 | CX3g025698 | LOC_Os03g56540 | Os03g0776900 | - | Detail |
| C2H3g09900 | 3:29,461,207-29,462,985 | + | C1H3g04407 | CX3g029754 | LOC_Os03g56580 | Os03g0777000 | ONAC066 | Detail |
| C2H3g20066 | 3:29,464,687-29,467,678 | - | C1H3g14095 | CX3g026134 | LOC_Os03g56590 | Os03g0777100 | - | Detail |
| C2H3g09685 | 3:29,469,144-29,470,883 | - | C1H3g29609 | CX3g028274 | LOC_Os03g56610 | Os03g0777500 | - | Detail |
| C2H3g13878 | 3:29,476,702-29,479,338 | + | C1H3g10794 | CX3g026442 | LOC_Os03g56620 | Os03g0777600 | - | Detail |
| C2H3g10928 | 3:29,479,505-29,485,846 | - | C1H3g30679 | CX3g029819 | LOC_Os03g56630 | Os03g0777700 | - | Detail |
| C2H3g07763 | 3:29,491,830-29,499,002 | + | C1H3g05671 | CX3g031249 | LOC_Os03g56660 | Os03g0778000 | - | Detail |
| C2H3g24740 | 3:29,576,904-29,577,827 | - | C1H3g21633 | CX3g030337 | LOC_Os03g56730 | Os03g0779000 | - | Detail |
| C2H3g01525 | 3:29,588,873-29,589,732 | - | - | CX3g027209 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049137 | 7:19,804,324-19,806,794 | - | C1H7g21039 | C2H7g03174 | LOC_Os07g40270 | Os07g0592300 | - | Detail |
| CX7g049733 | 7:19,815,055-19,816,978 | - | C1H7g02869 | C2H7g22433 | LOC_Os07g40290 | Os07g0592600 | GH3-8, OsGH3-8, OsMGH3, OsGH3.8 | Detail |
| CX7g049556 | 7:19,826,390-19,826,767 | + | C1H7g16316 | - | LOC_Os07g40300 | Os07g0593000 | OsZFP7, ZFP207 | Detail |
| CX7g049977 | 7:19,828,022-19,828,177 | - | - | - | - | Os07g0595750 | - | Detail |
| CX7g047926 | 7:19,830,394-19,832,163 | - | C1H7g18243 | C2H7g12167 | LOC_Os07g40310 | - | - | Detail |
| CX7g047684 | 7:19,834,334-19,834,834 | + | C1H7g16644 | C2H7g01135 | LOC_Os07g40320 | Os07g0593332 | - | Detail |
| CX7g050364 | 7:19,838,896-19,839,766 | + | C1H7g16524 | C2H7g01135 | LOC_Os07g40320 | Os07g0593400 | - | Detail |
| CX7g048935 | 7:19,841,733-19,842,083 | - | C1H7g14732 | C2H7g06962 | LOC_Os07g43840 | - | - | Detail |
| CX7g050186 | 7:19,852,061-19,854,118 | - | C1H7g30134 | C2H7g02982 | LOC_Os07g40450 | Os07g0595700 | - | Detail |
| CX7g049788 | 7:19,854,813-19,856,135 | + | C1H7g10262 | C2H7g17231 | LOC_Os07g40460 | Os07g0595800 | - | Detail |
| CX7g048836 | 7:19,859,420-19,860,370 | + | C1H7g22013 | C2H7g17231 | LOC_Os07g40470 | Os07g0595900 | - | Detail |
| CX7g047066 | 7:19,862,461-19,866,936 | - | C1H7g19375 | C2H7g07360 | LOC_Os07g40480 | Os07g0596000 | - | Detail |
| CX7g049639 | 7:19,874,835-19,881,529 | - | C1H7g29391 | C2H7g03480 | LOC_Os07g40510 | Os07g0596300 | BUI1, FH5, FH5/BUI1, RMD, FH5/RMD | Detail |
| CX7g050284 | 7:19,896,078-19,900,430 | - | C1H7g11056 | C2H7g15220 | LOC_Os07g40550 | Os07g0596600 | - | Detail |
| CX7g047007 | 7:19,908,497-19,908,670 | - | - | - | - | Os07g0596950 | - | Detail |
| CX7g046994 | 7:19,914,354-19,917,450 | - | C1H7g28882 | C2H7g07699 | LOC_Os07g40570 | Os07g0596900 | OsWRKY88 | Detail |
| CX7g049992 | 7:19,920,278-19,923,556 | - | C1H7g19203 | C2H7g04244 | LOC_Os07g40580 | Os07g0597000 | OseIF5A-1 | Detail |
| CX7g050251 | 7:19,927,567-19,927,809 | - | - | - | LOC_Os08g11340 | - | - | Detail |
| CX7g050100 | 7:19,929,718-19,934,094 | + | C1H7g18579 | C2H7g19239 | LOC_Os07g40620 | Os07g0597100 | - | Detail |
| CX7g046666 | 7:19,936,742-19,940,130 | - | C1H7g09348 | C2H7g13860 | LOC_Os07g40630 | Os07g0597200 | - | Detail |