| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g27274 | 4:6,457,124-6,459,649 | + | C2H4g09067 | CX4g035833 | LOC_Os04g13590 | Os04g0152400 | - | Detail |
| C1H4g25587 | 4:6,460,674-6,461,745 | - | C2H4g16880 | CX4g036574 | LOC_Os04g13640 | Os04g0213800 | - | Detail |
| C1H4g15363 | 4:6,604,112-6,604,753 | + | - | - | - | - | - | Detail |
| C1H4g17468 | 4:6,611,949-6,620,249 | + | C2H4g05575 | CX4g034062 | LOC_Os04g14190 | Os04g0218900 | - | Detail |
| C1H4g24799 | 4:6,626,740-6,641,553 | - | C2H4g12846 | CX4g036380 | LOC_Os04g14130 | Os04g0218100 | - | Detail |
| C1H4g07392 | 4:6,636,018-6,636,413 | + | - | CX4g034808 | - | - | - | Detail |
| C1H4g11293 | 4:6,652,987-6,654,719 | + | C2H4g06266 | CX4g033734 | LOC_Os04g14150 | Os04g0218400 | - | Detail |
| C1H4g14612 | 4:6,659,685-6,672,849 | + | C2H4g12846 | CX4g036573 | - | Os04g0218701 | - | Detail |
| C1H4g05360 | 4:6,682,360-6,683,534 | + | C2H4g05575 | CX4g034062 | LOC_Os04g14190 | Os04g0218900 | - | Detail |
| C1H4g10417 | 4:6,693,289-6,693,990 | + | - | CX4g031839 | LOC_Os04g14200 | - | - | Detail |
| C1H4g21081 | 4:6,707,113-6,709,845 | - | C2H4g08504 | CX4g035009 | LOC_Os04g14220 | Os04g0219600 | - | Detail |
| C1H4g27364 | 4:6,716,602-6,717,487 | + | - | - | - | Os04g0219700 | - | Detail |
| C1H4g19172 | 4:6,719,398-6,719,902 | - | - | - | LOC_Os04g14240 | - | - | Detail |
| C1H4g23599 | 4:6,720,873-6,724,534 | + | - | - | LOC_Os04g14250 | Os04g0219800 | - | Detail |
| C1H4g15248 | 4:6,733,727-6,734,644 | + | C2H4g23433 | CX4g032084 | LOC_Os04g14304 | Os04g0220300 | - | Detail |
| C1H4g13899 | 4:6,737,720-6,738,748 | + | C2H4g23433 | CX4g034432 | LOC_Os04g14304 | Os04g0220300 | - | Detail |
| C1H4g19028 | 4:6,749,313-6,750,067 | + | C2H4g14413 | CX4g036444 | LOC_Os04g14304 | Os04g0220300 | - | Detail |
| C1H4g06358 | 4:6,750,893-6,751,321 | + | C2H4g14413 | CX4g036444 | LOC_Os04g15650 | Os04g0113100 | - | Detail |
| C1H4g14603 | 4:6,776,450-6,779,953 | - | C2H4g27049 | CX4g035385 | LOC_Os04g14340 | Os04g0220501 | - | Detail |
| C1H4g12802 | 4:6,786,306-6,786,752 | - | C2H4g03840 | CX4g035733 | LOC_Os04g14360 | Os04g0221000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g049137 | 7:19,804,324-19,806,794 | - | C1H7g21039 | C2H7g03174 | LOC_Os07g40270 | Os07g0592300 | - | Detail |
| CX7g049733 | 7:19,815,055-19,816,978 | - | C1H7g02869 | C2H7g22433 | LOC_Os07g40290 | Os07g0592600 | GH3-8, OsGH3-8, OsMGH3, OsGH3.8 | Detail |
| CX7g049556 | 7:19,826,390-19,826,767 | + | C1H7g16316 | - | LOC_Os07g40300 | Os07g0593000 | OsZFP7, ZFP207 | Detail |
| CX7g049977 | 7:19,828,022-19,828,177 | - | - | - | - | Os07g0595750 | - | Detail |
| CX7g047926 | 7:19,830,394-19,832,163 | - | C1H7g18243 | C2H7g12167 | LOC_Os07g40310 | - | - | Detail |
| CX7g047684 | 7:19,834,334-19,834,834 | + | C1H7g16644 | C2H7g01135 | LOC_Os07g40320 | Os07g0593332 | - | Detail |
| CX7g050364 | 7:19,838,896-19,839,766 | + | C1H7g16524 | C2H7g01135 | LOC_Os07g40320 | Os07g0593400 | - | Detail |
| CX7g048935 | 7:19,841,733-19,842,083 | - | C1H7g14732 | C2H7g06962 | LOC_Os07g43840 | - | - | Detail |
| CX7g050186 | 7:19,852,061-19,854,118 | - | C1H7g30134 | C2H7g02982 | LOC_Os07g40450 | Os07g0595700 | - | Detail |
| CX7g049788 | 7:19,854,813-19,856,135 | + | C1H7g10262 | C2H7g17231 | LOC_Os07g40460 | Os07g0595800 | - | Detail |
| CX7g048836 | 7:19,859,420-19,860,370 | + | C1H7g22013 | C2H7g17231 | LOC_Os07g40470 | Os07g0595900 | - | Detail |
| CX7g047066 | 7:19,862,461-19,866,936 | - | C1H7g19375 | C2H7g07360 | LOC_Os07g40480 | Os07g0596000 | - | Detail |
| CX7g049639 | 7:19,874,835-19,881,529 | - | C1H7g29391 | C2H7g03480 | LOC_Os07g40510 | Os07g0596300 | BUI1, FH5, FH5/BUI1, RMD, FH5/RMD | Detail |
| CX7g050284 | 7:19,896,078-19,900,430 | - | C1H7g11056 | C2H7g15220 | LOC_Os07g40550 | Os07g0596600 | - | Detail |
| CX7g047007 | 7:19,908,497-19,908,670 | - | - | - | - | Os07g0596950 | - | Detail |
| CX7g046994 | 7:19,914,354-19,917,450 | - | C1H7g28882 | C2H7g07699 | LOC_Os07g40570 | Os07g0596900 | OsWRKY88 | Detail |
| CX7g049992 | 7:19,920,278-19,923,556 | - | C1H7g19203 | C2H7g04244 | LOC_Os07g40580 | Os07g0597000 | OseIF5A-1 | Detail |
| CX7g050251 | 7:19,927,567-19,927,809 | - | - | - | LOC_Os08g11340 | - | - | Detail |
| CX7g050100 | 7:19,929,718-19,934,094 | + | C1H7g18579 | C2H7g19239 | LOC_Os07g40620 | Os07g0597100 | - | Detail |
| CX7g046666 | 7:19,936,742-19,940,130 | - | C1H7g09348 | C2H7g13860 | LOC_Os07g40630 | Os07g0597200 | - | Detail |