| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g13076 | 9:1,074,186-1,078,909 | - | C1H9g16164 | CX9g055750 | LOC_Os09g02729 | Os09g0115600 | - | Detail |
| C2H9g18574 | 9:1,080,159-1,080,771 | + | C1H9g08981 | - | - | - | - | Detail |
| C2H9g25985 | 9:1,081,888-1,082,825 | + | C1H9g28466 | CX9g054999 | LOC_Os09g02770 | Os09g0115900 | - | Detail |
| C2H9g09926 | 9:1,104,476-1,105,048 | - | - | CX9g056283 | LOC_Os09g02780 | Os09g0116000 | - | Detail |
| C2H9g23279 | 9:1,110,105-1,115,472 | - | C1H9g21332 | CX9g055162 | LOC_Os09g02790 | Os09g0116050 | - | Detail |
| C2H9g04644 | 9:1,130,557-1,143,021 | + | C1H9g29492 | CX9g056724 | LOC_Os09g02810 | Os09g0116400 | - | Detail |
| C2H9g22732 | 9:1,145,303-1,147,196 | - | - | CX9g055488 | - | - | - | Detail |
| C2H9g00107 | 9:1,150,518-1,151,141 | - | - | CX9g057906 | LOC_Os09g02830 | Os09g0116800 | MADS78 | Detail |
| C2H9g06624 | 9:1,163,054-1,163,302 | - | - | CX9g057461 | - | Os09g0116900 | - | Detail |
| C2H9g11741 | 9:1,221,569-1,226,009 | - | C1H9g13392 | CX9g057143 | LOC_Os09g03090 | Os09g0119100 | - | Detail |
| C2H9g02668 | 9:1,244,928-1,246,433 | + | - | CX9g055648 | LOC_Os09g03140 | Os09g0119600 | - | Detail |
| C2H9g21669 | 9:1,265,570-1,268,523 | + | C1H9g28426 | CX9g057886 | LOC_Os09g03210 | Os09g0120100 | - | Detail |
| C2H9g18201 | 9:1,291,805-1,316,788 | + | C1H9g22761 | CX9g055691 | LOC_Os09g03370 | Os09g0121000 | OsSMC6 | Detail |
| C2H9g13235 | 9:1,366,892-1,368,363 | + | C1H9g26557 | CX9g057481 | LOC_Os09g03490 | Os09g0121900 | - | Detail |
| C2H9g13516 | 9:1,372,683-1,374,035 | + | C1H9g10296 | CX9g055867 | LOC_Os09g03500 | Os09g0122000 | - | Detail |
| C2H9g16547 | 9:1,410,681-1,419,869 | + | - | - | - | Os09g0122500 | - | Detail |
| C2H9g23970 | 9:1,450,894-1,456,896 | + | C1H9g12405 | CX9g057056 | LOC_Os09g03600 | Os09g0123100 | - | Detail |
| C2H9g12853 | 9:1,463,079-1,472,080 | + | C1H9g01360 | CX9g057275 | LOC_Os09g03610 | Os09g0123200 | - | Detail |
| C2H9g03310 | 9:1,476,356-1,483,333 | + | C1H9g19981 | CX9g058087 | LOC_Os09g03620 | Os09g0123300 | - | Detail |
| C2H9g23078 | 9:1,483,604-1,484,898 | - | C1H9g25910 | - | - | Os09g0123400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000021 | 1:27,402,155-27,403,630 | + | C1H1g17596 | C2H1g27577 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| CX1g002631 | 1:27,417,575-27,418,975 | + | C1H1g17596 | C2H1g27577 | LOC_Os01g53390 | Os01g0735300 | - | Detail |
| CX1g004334 | 1:27,423,749-27,425,179 | - | C1H1g12410 | C2H1g28000 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| CX1g005230 | 1:27,430,274-27,431,698 | - | C1H1g11199 | C2H1g03039 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| CX1g005942 | 1:27,440,937-27,444,278 | + | C1H1g04228 | C2H1g23129 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| CX1g003434 | 1:27,445,844-27,446,596 | + | C1H1g11257 | C2H1g09664 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| CX1g006022 | 1:27,452,926-27,453,858 | - | - | - | - | - | - | Detail |
| CX1g003962 | 1:27,461,294-27,462,860 | + | C1H1g18188 | C2H1g22559 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| CX1g006259 | 1:27,467,438-27,468,160 | - | - | - | LOC_Os01g53550 | Os01g0737100 | - | Detail |
| CX1g006682 | 1:27,473,968-27,480,332 | + | C1H1g17501 | C2H1g29848 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| CX1g007234 | 1:27,485,418-27,487,658 | + | C1H1g26053 | C2H1g23141 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| CX1g000486 | 1:27,489,647-27,490,273 | + | C1H1g28789 | C2H1g28481 | LOC_Os01g53580 | Os01g0737600 | - | Detail |
| CX1g001301 | 1:27,494,096-27,494,722 | + | C1H1g28789 | C2H1g28481 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| CX1g004371 | 1:27,496,671-27,500,763 | - | C1H1g20246 | C2H1g06822 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| CX1g003960 | 1:27,500,987-27,503,857 | + | C1H1g10368 | C2H1g22933 | LOC_Os01g53610 | Os01g0737900 | DYW3 | Detail |
| CX1g007226 | 1:27,506,101-27,506,502 | + | C1H1g29380 | C2H1g30197 | LOC_Os01g53620 | Os01g0738000 | - | Detail |
| CX1g002866 | 1:27,508,969-27,516,304 | - | C1H1g12561 | C2H1g26273 | LOC_Os01g53630 | Os01g0738100 | - | Detail |
| CX1g000101 | 1:27,534,125-27,540,340 | + | C1H1g20235 | C2H1g06044 | LOC_Os01g53640 | Os01g0738300 | - | Detail |
| CX1g003656 | 1:27,541,916-27,542,599 | + | - | - | LOC_Os01g53650 | Os01g0738400 | OsC3H10 | Detail |
| CX1g001943 | 1:27,549,744-27,552,321 | + | C1H1g20301 | C2H1g19036 | LOC_Os01g53660 | Os01g0738500 | - | Detail |