| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g16839 | 5:20,626,409-20,632,107 | + | C1H5g17713 | CX5g040928 | LOC_Os05g41795 | Os05g0497600 | OsAIR1, AIR1 | Detail |
| C2H5g11087 | 5:20,634,115-20,636,104 | + | C1H5g13253 | CX5g039298 | LOC_Os05g41800 | Os05g0497675 | - | Detail |
| C2H5g10568 | 5:20,636,756-20,642,128 | - | C1H5g27914 | CX5g040599 | LOC_Os05g41810 | Os05g0497700 | - | Detail |
| C2H5g27281 | 5:20,654,229-20,654,801 | - | C1H5g15467 | CX5g039834 | LOC_Os05g41870 | Os05g0498200 | - | Detail |
| C2H5g03550 | 5:20,656,569-20,667,846 | + | C1H5g00818 | CX5g038090 | LOC_Os05g41880 | Os05g0498300 | OsMSH5 | Detail |
| C2H5g07561 | 5:20,669,795-20,670,647 | + | C1H5g23053 | CX5g041007 | LOC_Os05g41900 | Os05g0498400 | - | Detail |
| C2H5g20540 | 5:20,673,729-20,676,845 | - | C1H5g22087 | CX5g037671 | LOC_Os05g41910 | Os05g0498500 | - | Detail |
| C2H5g05803 | 5:20,681,272-20,684,367 | + | - | CX1g001752 | LOC_Os05g41920 | - | - | Detail |
| C2H5g08647 | 5:20,684,982-20,687,682 | - | C1H5g16508 | CX5g036819 | LOC_Os05g41930 | Os05g0498700 | OsNRP5 | Detail |
| C2H5g02834 | 5:20,694,239-20,696,874 | - | C1H5g11668 | CX5g038006 | LOC_Os05g41950 | Os05g0498900 | - | Detail |
| C2H5g07577 | 5:20,698,178-20,698,756 | - | C1H5g27146 | CX5g038210 | LOC_Os05g41970 | Os05g0499100 | - | Detail |
| C2H5g10838 | 5:20,703,746-20,705,402 | + | C1H5g01020 | CX5g037732 | LOC_Os05g41990 | Os05g0499300 | - | Detail |
| C2H5g21405 | 5:20,707,461-20,709,151 | + | C1H5g03879 | CX5g037740 | LOC_Os05g42000 | Os05g0499400 | - | Detail |
| C2H5g23263 | 5:20,709,637-20,713,385 | - | C1H5g13308 | CX5g037878 | LOC_Os05g42010 | Os05g0499500 | - | Detail |
| C2H5g04911 | 5:20,714,908-20,716,389 | + | C1H5g01320 | CX5g038550 | LOC_Os05g42020 | Os05g0499600 | - | Detail |
| C2H5g17038 | 5:20,717,363-20,717,911 | + | - | - | LOC_Os05g29940 | - | - | Detail |
| C2H5g10638 | 5:20,720,782-20,722,236 | + | C1H5g19452 | CX5g038976 | LOC_Os05g42040 | Os05g0499800 | - | Detail |
| C2H5g10132 | 5:20,727,421-20,728,887 | + | C1H5g22889 | CX5g039781 | LOC_Os05g42060 | Os05g0500000 | - | Detail |
| C2H5g07901 | 5:20,731,994-20,733,427 | + | C1H5g23324 | CX5g040913 | LOC_Os05g42070 | Os05g0500200 | - | Detail |
| C2H5g04270 | 5:20,734,648-20,735,958 | - | C1H5g11073 | CX5g038191 | - | Os05g0500300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000021 | 1:27,402,155-27,403,630 | + | C1H1g17596 | C2H1g27577 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| CX1g002631 | 1:27,417,575-27,418,975 | + | C1H1g17596 | C2H1g27577 | LOC_Os01g53390 | Os01g0735300 | - | Detail |
| CX1g004334 | 1:27,423,749-27,425,179 | - | C1H1g12410 | C2H1g28000 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| CX1g005230 | 1:27,430,274-27,431,698 | - | C1H1g11199 | C2H1g03039 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| CX1g005942 | 1:27,440,937-27,444,278 | + | C1H1g04228 | C2H1g23129 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| CX1g003434 | 1:27,445,844-27,446,596 | + | C1H1g11257 | C2H1g09664 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| CX1g006022 | 1:27,452,926-27,453,858 | - | - | - | - | - | - | Detail |
| CX1g003962 | 1:27,461,294-27,462,860 | + | C1H1g18188 | C2H1g22559 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| CX1g006259 | 1:27,467,438-27,468,160 | - | - | - | LOC_Os01g53550 | Os01g0737100 | - | Detail |
| CX1g006682 | 1:27,473,968-27,480,332 | + | C1H1g17501 | C2H1g29848 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| CX1g007234 | 1:27,485,418-27,487,658 | + | C1H1g26053 | C2H1g23141 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| CX1g000486 | 1:27,489,647-27,490,273 | + | C1H1g28789 | C2H1g28481 | LOC_Os01g53580 | Os01g0737600 | - | Detail |
| CX1g001301 | 1:27,494,096-27,494,722 | + | C1H1g28789 | C2H1g28481 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| CX1g004371 | 1:27,496,671-27,500,763 | - | C1H1g20246 | C2H1g06822 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| CX1g003960 | 1:27,500,987-27,503,857 | + | C1H1g10368 | C2H1g22933 | LOC_Os01g53610 | Os01g0737900 | DYW3 | Detail |
| CX1g007226 | 1:27,506,101-27,506,502 | + | C1H1g29380 | C2H1g30197 | LOC_Os01g53620 | Os01g0738000 | - | Detail |
| CX1g002866 | 1:27,508,969-27,516,304 | - | C1H1g12561 | C2H1g26273 | LOC_Os01g53630 | Os01g0738100 | - | Detail |
| CX1g000101 | 1:27,534,125-27,540,340 | + | C1H1g20235 | C2H1g06044 | LOC_Os01g53640 | Os01g0738300 | - | Detail |
| CX1g003656 | 1:27,541,916-27,542,599 | + | - | - | LOC_Os01g53650 | Os01g0738400 | OsC3H10 | Detail |
| CX1g001943 | 1:27,549,744-27,552,321 | + | C1H1g20301 | C2H1g19036 | LOC_Os01g53660 | Os01g0738500 | - | Detail |