| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g08810 | 9:12,030,394-12,030,648 | + | C2H9g10864 | CX1g005092 | LOC_Os01g02050 | Os01g0110700 | - | Detail |
| C1H9g20900 | 9:12,035,423-12,037,823 | - | C2H9g24788 | CX9g058102 | LOC_Os09g24490 | Os09g0410700 | - | Detail |
| C1H9g20141 | 9:12,047,191-12,048,447 | + | C2H9g22733 | CX9g055159 | - | - | - | Detail |
| C1H9g14098 | 9:12,054,850-12,056,899 | + | C2H9g29686 | CX9g057499 | - | Os09g0411500 | - | Detail |
| C1H9g27648 | 9:12,057,578-12,059,221 | - | C2H9g08999 | CX9g055250 | LOC_Os09g24520 | Os09g0411600 | - | Detail |
| C1H9g15710 | 9:12,060,097-12,062,297 | - | C2H9g24020 | CX9g055887 | LOC_Os09g24530 | Os09g0411650 | - | Detail |
| C1H9g26658 | 9:12,063,561-12,065,573 | - | C2H9g15723 | - | LOC_Os09g24540 | Os09g0411700 | - | Detail |
| C1H9g25817 | 9:12,070,509-12,071,525 | - | C2H9g30013 | CX9g056422 | LOC_Os09g24560 | Os09g0411900 | - | Detail |
| C1H9g11852 | 9:12,080,227-12,080,736 | - | C2H9g19569 | CX9g056828 | LOC_Os09g36830 | Os09g0412050 | - | Detail |
| C1H9g04539 | 9:12,081,452-12,084,659 | - | C2H9g29693 | CX9g055609 | LOC_Os09g24570 | Os09g0412200 | - | Detail |
| C1H9g10655 | 9:12,086,877-12,087,398 | - | C2H9g21780 | CX9g054907 | LOC_Os09g24580 | Os09g0412300 | - | Detail |
| C1H9g24887 | 9:12,097,302-12,097,676 | - | C2H9g24987 | CX9g056335 | LOC_Os09g24590 | Os09g0412400 | - | Detail |
| C1H9g25612 | 9:12,107,462-12,108,871 | + | C2H9g22954 | CX9g056498 | LOC_Os09g24620 | Os09g0412700 | - | Detail |
| C1H9g29027 | 9:12,111,255-12,112,766 | + | C2H9g08999 | CX9g057109 | LOC_Os09g24640 | Os09g0412900 | - | Detail |
| C1H9g10917 | 9:12,116,662-12,121,711 | + | C2H9g30609 | CX9g055582 | LOC_Os09g24650 | Os09g0413000 | - | Detail |
| C1H9g25606 | 9:12,122,597-12,125,827 | - | C2H9g23813 | CX9g054861 | LOC_Os09g24660 | Os09g0413100 | - | Detail |
| C1H9g01483 | 9:12,125,928-12,129,855 | + | C2H9g23311 | CX9g055611 | LOC_Os09g24670 | Os09g0413200 | - | Detail |
| C1H9g27670 | 9:12,132,894-12,135,332 | - | C2H9g07064 | CX9g055527 | LOC_Os09g24680 | Os09g0413300 | OsPPR1 | Detail |
| C1H9g13850 | 9:12,136,686-12,138,300 | - | C2H9g21107 | CX9g055730 | LOC_Os09g24690 | Os09g0413500 | - | Detail |
| C1H9g31189 | 9:12,139,771-12,144,382 | - | C2H9g10108 | CX9g055962 | LOC_Os09g24700 | Os09g0413600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000021 | 1:27,402,155-27,403,630 | + | C1H1g17596 | C2H1g27577 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| CX1g002631 | 1:27,417,575-27,418,975 | + | C1H1g17596 | C2H1g27577 | LOC_Os01g53390 | Os01g0735300 | - | Detail |
| CX1g004334 | 1:27,423,749-27,425,179 | - | C1H1g12410 | C2H1g28000 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| CX1g005230 | 1:27,430,274-27,431,698 | - | C1H1g11199 | C2H1g03039 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| CX1g005942 | 1:27,440,937-27,444,278 | + | C1H1g04228 | C2H1g23129 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| CX1g003434 | 1:27,445,844-27,446,596 | + | C1H1g11257 | C2H1g09664 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| CX1g006022 | 1:27,452,926-27,453,858 | - | - | - | - | - | - | Detail |
| CX1g003962 | 1:27,461,294-27,462,860 | + | C1H1g18188 | C2H1g22559 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| CX1g006259 | 1:27,467,438-27,468,160 | - | - | - | LOC_Os01g53550 | Os01g0737100 | - | Detail |
| CX1g006682 | 1:27,473,968-27,480,332 | + | C1H1g17501 | C2H1g29848 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| CX1g007234 | 1:27,485,418-27,487,658 | + | C1H1g26053 | C2H1g23141 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| CX1g000486 | 1:27,489,647-27,490,273 | + | C1H1g28789 | C2H1g28481 | LOC_Os01g53580 | Os01g0737600 | - | Detail |
| CX1g001301 | 1:27,494,096-27,494,722 | + | C1H1g28789 | C2H1g28481 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| CX1g004371 | 1:27,496,671-27,500,763 | - | C1H1g20246 | C2H1g06822 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| CX1g003960 | 1:27,500,987-27,503,857 | + | C1H1g10368 | C2H1g22933 | LOC_Os01g53610 | Os01g0737900 | DYW3 | Detail |
| CX1g007226 | 1:27,506,101-27,506,502 | + | C1H1g29380 | C2H1g30197 | LOC_Os01g53620 | Os01g0738000 | - | Detail |
| CX1g002866 | 1:27,508,969-27,516,304 | - | C1H1g12561 | C2H1g26273 | LOC_Os01g53630 | Os01g0738100 | - | Detail |
| CX1g000101 | 1:27,534,125-27,540,340 | + | C1H1g20235 | C2H1g06044 | LOC_Os01g53640 | Os01g0738300 | - | Detail |
| CX1g003656 | 1:27,541,916-27,542,599 | + | - | - | LOC_Os01g53650 | Os01g0738400 | OsC3H10 | Detail |
| CX1g001943 | 1:27,549,744-27,552,321 | + | C1H1g20301 | C2H1g19036 | LOC_Os01g53660 | Os01g0738500 | - | Detail |