| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02942 | 1:30,031,566-30,034,970 | + | C2H1g13385 | CX1g000031 | LOC_Os01g58240 | Os01g0794800 | - | Detail |
| C1H1g25833 | 1:30,032,232-30,036,904 | - | C2H1g21351 | - | - | - | - | Detail |
| C1H1g25653 | 1:30,039,800-30,047,154 | + | C2H1g29117 | CX1g000031 | LOC_Os01g58240 | Os01g0795000 | RSP1 | Detail |
| C1H1g21214 | 1:30,049,868-30,054,395 | + | C2H1g27055 | CX1g000031 | LOC_Os01g58270 | Os01g0795100 | - | Detail |
| C1H1g12866 | 1:30,057,062-30,057,763 | - | - | - | - | - | - | Detail |
| C1H1g23689 | 1:30,059,471-30,062,823 | + | C2H1g17970 | CX1g000031 | LOC_Os01g58280 | Os01g0795200 | - | Detail |
| C1H1g13842 | 1:30,066,199-30,070,778 | + | C2H1g21575 | CX1g000031 | LOC_Os01g58290 | Os01g0795400 | Hwi2 | Detail |
| C1H1g19856 | 1:30,072,039-30,072,287 | + | C2H1g04222 | - | LOC_Os01g58310 | Os01g0795600 | - | Detail |
| C1H1g00284 | 1:30,073,389-30,073,613 | + | C2H1g14294 | - | LOC_Os01g58340 | Os01g0795900 | - | Detail |
| C1H1g24727 | 1:30,080,859-30,081,098 | + | C2H1g04222 | - | LOC_Os01g58310 | Os01g0795900 | - | Detail |
| C1H1g15205 | 1:30,092,878-30,095,404 | + | C2H1g23146 | CX1g003893 | LOC_Os01g58380 | Os01g0796400 | - | Detail |
| C1H1g14537 | 1:30,095,888-30,097,988 | - | C2H1g07599 | CX1g005123 | LOC_Os01g58390 | Os01g0796500 | - | Detail |
| C1H1g28486 | 1:30,101,988-30,106,936 | - | C2H1g05560 | CX1g003555 | LOC_Os01g58400 | Os01g0796700 | - | Detail |
| C1H1g15191 | 1:30,109,637-30,110,248 | - | C2H1g00808 | - | - | - | - | Detail |
| C1H1g16633 | 1:30,118,323-30,118,856 | + | - | CX1g006863 | - | - | - | Detail |
| C1H1g08851 | 1:30,124,810-30,125,520 | + | C2H1g04740 | CX1g004754 | LOC_Os01g58420 | Os01g0797600 | ERF3, AP37, OsAP37, OsERF3, OsERF#075, OsERF075, OsERF75, ERF75, AP2/EREBP#004, AP2/EREBP4, OsBIERF2, BIERF2 | Detail |
| C1H1g04740 | 1:30,146,507-30,150,478 | + | C2H1g19057 | CX1g002330 | LOC_Os01g58470 | Os01g0798500 | OsY3IP1 | Detail |
| C1H1g24753 | 1:30,154,872-30,157,273 | - | C2H1g16159 | CX1g001040 | LOC_Os01g58500 | Os01g0798800 | - | Detail |
| C1H1g14458 | 1:30,157,504-30,158,697 | + | C2H1g05286 | CX1g005010 | LOC_Os01g58510 | Os01g0798900 | - | Detail |
| C1H1g21828 | 1:30,158,951-30,160,834 | - | C2H1g30085 | CX1g006206 | LOC_Os01g58520 | Os01g0799000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000021 | 1:27,402,155-27,403,630 | + | C1H1g17596 | C2H1g27577 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| CX1g002631 | 1:27,417,575-27,418,975 | + | C1H1g17596 | C2H1g27577 | LOC_Os01g53390 | Os01g0735300 | - | Detail |
| CX1g004334 | 1:27,423,749-27,425,179 | - | C1H1g12410 | C2H1g28000 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| CX1g005230 | 1:27,430,274-27,431,698 | - | C1H1g11199 | C2H1g03039 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| CX1g005942 | 1:27,440,937-27,444,278 | + | C1H1g04228 | C2H1g23129 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| CX1g003434 | 1:27,445,844-27,446,596 | + | C1H1g11257 | C2H1g09664 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| CX1g006022 | 1:27,452,926-27,453,858 | - | - | - | - | - | - | Detail |
| CX1g003962 | 1:27,461,294-27,462,860 | + | C1H1g18188 | C2H1g22559 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| CX1g006259 | 1:27,467,438-27,468,160 | - | - | - | LOC_Os01g53550 | Os01g0737100 | - | Detail |
| CX1g006682 | 1:27,473,968-27,480,332 | + | C1H1g17501 | C2H1g29848 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| CX1g007234 | 1:27,485,418-27,487,658 | + | C1H1g26053 | C2H1g23141 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| CX1g000486 | 1:27,489,647-27,490,273 | + | C1H1g28789 | C2H1g28481 | LOC_Os01g53580 | Os01g0737600 | - | Detail |
| CX1g001301 | 1:27,494,096-27,494,722 | + | C1H1g28789 | C2H1g28481 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| CX1g004371 | 1:27,496,671-27,500,763 | - | C1H1g20246 | C2H1g06822 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| CX1g003960 | 1:27,500,987-27,503,857 | + | C1H1g10368 | C2H1g22933 | LOC_Os01g53610 | Os01g0737900 | DYW3 | Detail |
| CX1g007226 | 1:27,506,101-27,506,502 | + | C1H1g29380 | C2H1g30197 | LOC_Os01g53620 | Os01g0738000 | - | Detail |
| CX1g002866 | 1:27,508,969-27,516,304 | - | C1H1g12561 | C2H1g26273 | LOC_Os01g53630 | Os01g0738100 | - | Detail |
| CX1g000101 | 1:27,534,125-27,540,340 | + | C1H1g20235 | C2H1g06044 | LOC_Os01g53640 | Os01g0738300 | - | Detail |
| CX1g003656 | 1:27,541,916-27,542,599 | + | - | - | LOC_Os01g53650 | Os01g0738400 | OsC3H10 | Detail |
| CX1g001943 | 1:27,549,744-27,552,321 | + | C1H1g20301 | C2H1g19036 | LOC_Os01g53660 | Os01g0738500 | - | Detail |