| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g24558 | 3:215,422-216,951 | + | C2H3g00666 | CX3g025803 | - | Os03g0103400 | - | Detail |
| C1H3g28077 | 3:226,654-228,073 | + | C2H3g07381 | CX3g025211 | LOC_Os03g01530 | Os03g0105600 | - | Detail |
| C1H3g23454 | 3:230,958-233,218 | - | C2H3g12984 | CX3g026334 | LOC_Os03g01540 | Os03g0105700 | OsAHL6 | Detail |
| C1H3g02722 | 3:234,782-238,690 | - | C2H3g00326 | CX3g030126 | LOC_Os03g01550 | Os03g0105800 | - | Detail |
| C1H3g03839 | 3:242,866-245,726 | - | C2H3g00355 | CX3g030694 | LOC_Os03g01570 | Os03g0106000 | - | Detail |
| C1H3g18280 | 3:247,522-252,767 | - | C2H3g00823 | CX3g029689 | LOC_Os03g01580 | Os03g0106200 | - | Detail |
| C1H3g03593 | 3:256,281-260,330 | - | C2H3g10053 | CX3g031070 | LOC_Os03g01590 | Os03g0106300 | PAIR1, Pair1 | Detail |
| C1H3g13137 | 3:260,921-265,419 | - | C2H3g14376 | CX3g025678 | LOC_Os03g01600 | Os03g0106400 | OsBCAT1 | Detail |
| C1H3g09448 | 3:273,006-273,809 | + | C2H3g19859 | CX3g025368 | LOC_Os03g01650 | Os03g0106500 | - | Detail |
| C1H3g20839 | 3:275,633-275,947 | + | C2H3g20988 | - | - | Os03g0106550 | - | Detail |
| C1H3g28471 | 3:278,533-279,336 | + | C2H3g29856 | CX3g030913 | LOC_Os03g01610 | Os03g0106900 | - | Detail |
| C1H3g09211 | 3:284,012-284,815 | + | C2H3g24000 | CX3g029182 | LOC_Os03g01640 | Os03g0106800 | - | Detail |
| C1H3g27934 | 3:287,197-288,000 | - | C2H3g19859 | CX3g029495 | LOC_Os03g01610 | Os03g0106900 | - | Detail |
| C1H3g02983 | 3:291,849-295,865 | - | C2H3g18319 | CX3g030834 | LOC_Os03g01660 | Os03g0107000 | - | Detail |
| C1H3g17953 | 3:297,610-299,591 | + | C2H3g12781 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C1H3g31596 | 3:299,600-304,440 | + | C2H3g12928 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C1H3g21747 | 3:306,940-308,391 | - | C2H3g02258 | CX3g026726 | LOC_Os03g01700 | Os03g0107300 | LSI2, Lsi2, SIET1, OsLsi2 | Detail |
| C1H3g27800 | 3:315,445-323,364 | + | C2H3g07101 | CX3g025905 | LOC_Os03g01710 | Os03g0107400 | - | Detail |
| C1H3g21135 | 3:327,587-331,824 | + | C2H3g28769 | CX3g028047 | LOC_Os03g01720 | Os03g0254900 | - | Detail |
| C1H3g04149 | 3:333,332-334,179 | + | C2H3g28769 | CX3g030693 | LOC_Os03g01720 | Os03g0107500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g046736 | 7:19,510,428-19,511,315 | + | C1H7g11284 | - | LOC_Os07g39720 | Os07g0585900 | - | Detail |
| CX7g049839 | 7:19,512,228-19,515,423 | - | C1H7g26737 | C2H7g28026 | LOC_Os07g39730 | Os07g0586000 | - | Detail |
| CX7g046857 | 7:19,517,364-19,519,316 | - | C1H7g11177 | C2H7g03070 | LOC_Os07g39740 | Os07g0586100 | PChE | Detail |
| CX7g050090 | 7:19,520,818-19,524,328 | - | C1H7g31708 | C2H7g20298 | LOC_Os07g39750 | Os07g0586200 | - | Detail |
| CX7g046227 | 7:19,532,788-19,539,012 | + | C1H7g28144 | C2H7g01650 | LOC_Os07g39780 | Os07g0586500 | - | Detail |
| CX7g047062 | 7:19,540,477-19,541,067 | - | C1H7g30368 | - | LOC_Os07g39790 | Os07g0586600 | - | Detail |
| CX7g049224 | 7:19,541,809-19,544,496 | - | C1H7g03308 | C2H7g25217 | LOC_Os07g39800 | Os07g0586700 | - | Detail |
| CX7g049264 | 7:19,550,488-19,551,195 | - | C1H7g20287 | C2H7g10425 | LOC_Os07g39810 | Os07g0586800 | - | Detail |
| CX7g049212 | 7:19,569,024-19,570,829 | + | C1H7g26123 | C2H7g15547 | LOC_Os07g39820 | Os07g0586900 | OsSHR1 | Detail |
| CX7g047969 | 7:19,585,721-19,588,129 | + | C1H7g04106 | C2H7g30340 | LOC_Os07g39830 | Os07g0587000 | - | Detail |
| CX7g049988 | 7:19,588,994-19,590,920 | - | C1H7g17905 | C2H7g05226 | - | - | - | Detail |
| CX7g047961 | 7:19,594,780-19,597,850 | - | C1H7g10975 | C2H7g03999 | LOC_Os07g39840 | Os07g0587100 | - | Detail |
| CX7g047553 | 7:19,600,707-19,606,205 | - | C1H7g12981 | C2H7g16477 | LOC_Os07g39850 | Os07g0587250 | - | Detail |
| CX7g047421 | 7:19,609,185-19,609,460 | - | C1H7g02974 | C2H7g21246 | LOC_Os07g39860 | Os07g0587300 | - | Detail |
| CX7g049856 | 7:19,611,474-19,612,787 | - | C1H7g21618 | C2H7g09412 | LOC_Os07g39870 | Os07g0587400 | - | Detail |
| CX7g049014 | 7:19,618,596-19,619,787 | + | C1H7g20876 | C2H7g01401 | LOC_Os07g39590 | Os07g0587500 | - | Detail |
| CX7g046164 | 7:19,624,259-19,624,471 | + | - | - | - | - | - | Detail |
| CX7g049825 | 7:19,629,159-19,630,019 | + | C1H7g18991 | C2H7g00832 | LOC_Os08g36610 | Os08g0470000 | - | Detail |
| CX7g048955 | 7:19,635,021-19,640,008 | + | C1H7g24204 | C2H7g18878 | LOC_Os07g39900 | Os07g0588000 | - | Detail |
| CX7g049230 | 7:19,642,805-19,644,547 | - | C1H7g02347 | C2H7g11193 | LOC_Os07g39910 | Os07g0588100 | - | Detail |