| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g05843 | 1:4,407,490-4,408,767 | + | C1H1g27970 | CX1g005975 | LOC_Os01g09730 | Os01g0193400 | - | Detail |
| C2H1g21862 | 1:4,408,888-4,411,145 | - | C1H1g11468 | CX1g003550 | LOC_Os01g09740 | Os01g0193500 | - | Detail |
| C2H1g17174 | 1:4,413,170-4,417,512 | - | C1H1g10688 | CX1g000614 | LOC_Os01g09750 | Os01g0193600 | - | Detail |
| C2H1g04548 | 1:4,423,648-4,432,522 | + | C1H1g13152 | CX1g006629 | LOC_Os01g09760 | Os01g0193900 | OsALYL1 | Detail |
| C2H1g08327 | 1:4,432,798-4,436,269 | - | C1H1g06151 | CX1g002400 | LOC_Os01g09770 | Os01g0194000 | - | Detail |
| C2H1g05163 | 1:4,446,890-4,449,014 | - | C1H1g16281 | CX1g002653 | LOC_Os01g09790 | Os01g0194200 | - | Detail |
| C2H1g20037 | 1:4,454,004-4,458,589 | - | C1H1g29130 | CX1g000713 | LOC_Os01g09800 | Os01g0194300 | NH1, OsNH1, OsNPR1, OsNPR1/NH1, NPR1, OsPR2, PR2 | Detail |
| C2H1g05731 | 1:4,471,137-4,471,517 | + | C1H1g15115 | CX1g000442 | LOC_Os01g09830 | Os01g0194600 | - | Detail |
| C2H1g26832 | 1:4,481,098-4,483,672 | + | C1H1g00947 | CX1g005498 | LOC_Os01g09850 | Os01g0195000 | OsIDD2 | Detail |
| C2H1g03615 | 1:4,491,235-4,498,330 | - | C1H1g03034 | CX1g000509 | LOC_Os01g09860 | Os01g0195200 | - | Detail |
| C2H1g17887 | 1:4,508,755-4,509,393 | - | C1H1g10561 | CX1g001794 | LOC_Os01g09870 | Os01g0195300 | - | Detail |
| C2H1g12953 | 1:4,510,080-4,512,668 | - | - | - | - | - | - | Detail |
| C2H1g30117 | 1:4,514,337-4,515,203 | - | C1H1g31641 | CX1g003898 | LOC_Os01g09880 | Os01g0195400 | - | Detail |
| C2H1g28884 | 1:4,521,724-4,524,029 | - | C1H1g28666 | CX1g000703 | LOC_Os01g09890 | Os01g0195500 | - | Detail |
| C2H1g00669 | 1:4,526,288-4,526,542 | + | C1H1g30631 | - | - | - | - | Detail |
| C2H1g23471 | 1:4,532,493-4,532,820 | + | C1H1g18771 | CX1g006997 | LOC_Os01g09900 | Os01g0195700 | - | Detail |
| C2H1g25043 | 1:4,532,942-4,533,980 | + | C1H1g02897 | CX1g006997 | LOC_Os01g09900 | Os01g0195801 | - | Detail |
| C2H1g19433 | 1:4,541,970-4,542,264 | - | C1H1g13131 | CX12g016171 | LOC_Os12g41650 | Os12g0610200 | OsPIL11, OsbHLH102 | Detail |
| C2H1g29514 | 1:4,549,728-4,555,017 | + | C1H1g28746 | CX1g006997 | LOC_Os01g09930 | Os01g0196300 | DPF, OsbHLH025 | Detail |
| C2H1g19303 | 1:4,570,603-4,572,287 | + | C1H1g18771 | CX1g006997 | LOC_Os01g09990 | Os01g0196300 | DPF, OsbHLH025 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g050280 | 7:19,197,999-19,198,442 | - | C1H7g15630 | - | - | - | - | Detail |
| CX7g048168 | 7:19,199,886-19,203,971 | + | C1H7g08109 | C2H7g26214 | LOC_Os07g39010 | Os07g0578200 | - | Detail |
| CX7g049125 | 7:19,207,031-19,207,966 | + | C1H7g09375 | C2H7g03520 | LOC_Os07g39020 | Os07g0578300 | OsSUB53 | Detail |
| CX7g048887 | 7:19,222,535-19,222,723 | - | - | - | - | - | - | Detail |
| CX7g049026 | 7:19,225,539-19,228,777 | + | C1H7g15727 | C2H7g04691 | LOC_Os07g39070 | Os07g0578600 | - | Detail |
| CX7g046581 | 7:19,229,420-19,234,627 | - | C1H7g17984 | C2H7g08247 | LOC_Os07g39080 | Os07g0578800 | - | Detail |
| CX7g048261 | 7:19,241,216-19,241,560 | - | C1H7g11751 | C2H7g03721 | LOC_Os07g39190 | Os07g0580200 | - | Detail |
| CX7g047382 | 7:19,242,565-19,244,091 | - | C1H7g12507 | C2H7g11365 | LOC_Os07g39190 | Os07g0580200 | - | Detail |
| CX7g048907 | 7:19,247,674-19,248,771 | - | - | - | - | - | - | Detail |
| CX7g046523 | 7:19,250,156-19,257,853 | - | C1H7g06028 | C2H7g29030 | LOC_Os07g39240 | Os07g0580733 | - | Detail |
| CX7g049492 | 7:19,261,066-19,262,463 | - | C1H7g08358 | C2H7g12637 | LOC_Os07g39270 | Os07g0580900 | - | Detail |
| CX7g050055 | 7:19,268,281-19,271,318 | - | C1H7g03856 | C2H7g14303 | LOC_Os07g39280 | Os07g0581000 | - | Detail |
| CX7g048368 | 7:19,277,282-19,278,892 | + | C1H7g15256 | C2H7g06901 | LOC_Os07g39290 | Os07g0581100 | - | Detail |
| CX7g046103 | 7:19,285,859-19,293,568 | + | C1H7g10060 | C2H7g21308 | LOC_Os07g39300 | Os07g0581300 | - | Detail |
| CX7g047685 | 7:19,299,105-19,301,451 | + | C1H7g07068 | C2H7g01832 | LOC_Os07g39310 | Os07g0581366 | - | Detail |
| CX7g048012 | 7:19,302,052-19,302,324 | + | - | - | - | Os07g0581400 | - | Detail |
| CX7g046420 | 7:19,317,582-19,318,533 | + | C1H7g30840 | C2H7g23598 | LOC_Os07g39320 | Os07g0581700 | Oshox14 | Detail |
| CX7g049922 | 7:19,333,358-19,334,998 | + | C1H7g29245 | C2H7g30299 | LOC_Os07g39350 | Os07g0582400 | OsPLT5 | Detail |
| CX7g049260 | 7:19,335,803-19,337,476 | - | C1H7g10423 | C2H7g03226 | LOC_Os07g39360 | Os07g0582500 | OsPLT6 | Detail |
| CX7g046462 | 7:19,341,554-19,343,074 | - | C1H7g28695 | C2H7g03649 | LOC_Os07g39400 | Os07g0582850 | - | Detail |