| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19764 | 3:1,330,606-1,334,329 | - | C2H3g09637 | CX3g026825 | LOC_Os03g03470 | Os03g0126300 | - | Detail |
| C1H3g31582 | 3:1,335,457-1,336,167 | - | C2H3g01245 | CX3g030498 | LOC_Os03g03480 | Os03g0126450 | - | Detail |
| C1H3g28463 | 3:1,338,762-1,339,451 | + | C2H3g24889 | CX3g031250 | LOC_Os03g03490 | Os03g0126600 | - | Detail |
| C1H3g02888 | 3:1,341,626-1,342,499 | + | C2H3g03559 | CX3g026627 | LOC_Os03g03500 | Os03g0126700 | - | Detail |
| C1H3g13225 | 3:1,345,288-1,349,052 | - | C2H3g24408 | CX3g025902 | LOC_Os03g03510 | Os03g0126800 | CIPK9 | Detail |
| C1H3g17944 | 3:1,363,757-1,364,113 | - | C2H3g27173 | CX3g025296 | LOC_Os03g03520 | Os03g0126900 | - | Detail |
| C1H3g26030 | 3:1,366,868-1,368,510 | - | C2H3g18981 | CX3g025913 | LOC_Os03g03530 | Os03g0127000 | - | Detail |
| C1H3g10455 | 3:1,368,703-1,368,945 | + | C2H3g03780 | - | - | - | - | Detail |
| C1H3g07061 | 3:1,370,739-1,373,094 | - | C2H3g10836 | CX3g025702 | LOC_Os03g03540 | Os03g0624600 | - | Detail |
| C1H3g08724 | 3:1,391,370-1,393,759 | + | C2H3g05840 | CX3g026687 | LOC_Os03g03550 | Os03g0127500 | - | Detail |
| C1H3g30951 | 3:1,394,084-1,399,068 | - | C2H3g22731 | CX3g027794 | LOC_Os03g03560 | Os03g0127600 | - | Detail |
| C1H3g04194 | 3:1,401,840-1,405,188 | + | C2H3g10932 | CX3g029550 | LOC_Os03g03570 | Os03g0127700 | - | Detail |
| C1H3g21101 | 3:1,408,304-1,415,858 | - | C2H3g19343 | CX3g028222 | LOC_Os03g03590 | Os03g0127900 | - | Detail |
| C1H3g15997 | 3:1,419,564-1,420,769 | + | C2H3g04515 | CX3g029732 | LOC_Os03g03600 | Os03g0128000 | - | Detail |
| C1H3g11304 | 3:1,422,238-1,442,796 | - | C2H3g21656 | CX3g027243 | LOC_Os03g03610 | Os03g0128100 | - | Detail |
| C1H3g22245 | 3:1,447,989-1,448,556 | - | C2H3g11243 | CX3g025297 | LOC_Os03g03630 | Os03g0128300 | - | Detail |
| C1H3g27628 | 3:1,449,997-1,451,209 | - | C2H3g19615 | CX3g029085 | LOC_Os03g03640 | Os03g0128400 | - | Detail |
| C1H3g25549 | 3:1,452,071-1,455,805 | - | C2H3g24976 | CX3g029868 | LOC_Os03g03650 | Os03g0128500 | OsPolδ2 | Detail |
| C1H3g29800 | 3:1,467,042-1,471,416 | + | C2H3g12077 | CX3g027339 | LOC_Os03g03660 | Os03g0128700 | OsCPK7, OsCDPK13, OsCDPK1, OsCDPK11, OsCDPK12 | Detail |
| C1H3g05509 | 3:1,472,015-1,473,408 | - | C2H3g19950 | CX3g030927 | LOC_Os03g03670 | Os03g0128800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g047320 | 7:19,073,096-19,076,195 | + | C1H7g09987 | C2H7g22697 | LOC_Os07g38730 | Os07g0574800 | - | Detail |
| CX7g050009 | 7:19,080,605-19,081,753 | - | C1H7g29211 | C2H7g22384 | LOC_Os07g38750 | Os07g0575000 | - | Detail |
| CX7g048104 | 7:19,085,471-19,094,000 | - | C1H7g25414 | C2H7g11317 | LOC_Os07g38760 | Os07g0575100 | - | Detail |
| CX7g047702 | 7:19,098,432-19,101,139 | - | C1H7g24947 | C2H7g07954 | LOC_Os07g38790 | Os07g0575500 | - | Detail |
| CX7g049929 | 7:19,108,088-19,109,813 | + | C1H7g23024 | C2H7g14555 | LOC_Os07g38810 | Os07g0575700 | BDR1, OsBDR1 | Detail |
| CX7g047701 | 7:19,111,217-19,113,304 | - | C1H7g10660 | C2H7g09343 | LOC_Os07g38800 | Os07g0575600 | - | Detail |
| CX7g049340 | 7:19,115,431-19,117,437 | - | C1H7g23059 | C2H7g15597 | LOC_Os07g38810 | Os07g0575700 | BDR1, OsBDR1 | Detail |
| CX7g048725 | 7:19,122,161-19,124,251 | - | C1H7g12575 | C2H7g09343 | LOC_Os07g38820 | Os07g0575750 | - | Detail |
| CX7g046979 | 7:19,125,819-19,128,845 | + | C1H7g26772 | C2H7g09520 | LOC_Os07g38830 | Os07g0575800 | - | Detail |
| CX7g049127 | 7:19,131,372-19,134,034 | + | C1H7g12949 | C2H7g23779 | LOC_Os07g38840 | Os07g0575900 | - | Detail |
| CX7g046582 | 7:19,134,790-19,141,393 | + | C1H7g13318 | C2H7g06473 | LOC_Os07g38850 | Os07g0576000 | - | Detail |
| CX7g048069 | 7:19,154,131-19,156,951 | + | C1H7g19169 | C2H7g22244 | LOC_Os07g38930 | Os07g0577300 | - | Detail |
| CX7g048316 | 7:19,158,116-19,160,860 | + | C1H7g08892 | C2H7g20880 | LOC_Os07g38940 | Os07g0577400 | OsCOP10 | Detail |
| CX7g049970 | 7:19,161,706-19,162,773 | + | C1H7g01712 | C2H7g20911 | LOC_Os07g38950 | Os07g0577500 | - | Detail |
| CX7g049549 | 7:19,166,250-19,167,554 | + | C1H7g31740 | C2H7g24224 | LOC_Os07g38960 | Os07g0577600 | - | Detail |
| CX7g046502 | 7:19,169,405-19,173,718 | + | C1H7g25583 | C2H7g13296 | LOC_Os07g38970 | Os07g0577700 | - | Detail |
| CX7g046247 | 7:19,174,350-19,175,252 | - | C1H7g12402 | C2H7g14265 | LOC_Os07g39000 | Os07g0578125 | - | Detail |
| CX7g047232 | 7:19,179,697-19,181,748 | - | C1H7g29452 | C2H7g18776 | LOC_Os07g38990 | Os07g0577900 | - | Detail |
| CX7g048085 | 7:19,185,545-19,187,193 | + | C1H7g12402 | C2H7g14265 | LOC_Os07g39000 | Os07g0578125 | - | Detail |
| CX7g046415 | 7:19,195,491-19,195,754 | + | - | C2H1g05458 | - | - | - | Detail |