| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06770 | 2:9,086,090-9,092,576 | - | C1H2g04839 | CX2g020121 | LOC_Os02g17460 | Os02g0274600 | - | Detail |
| C2H2g25557 | 2:9,094,416-9,095,481 | + | C1H2g13080 | - | - | - | - | Detail |
| C2H2g12255 | 2:9,097,550-9,100,200 | + | C1H2g13080 | CX2g019862 | LOC_Os02g17470 | Os02g0274700 | - | Detail |
| C2H2g07148 | 2:9,111,459-9,118,310 | + | C1H2g20851 | CX2g020679 | LOC_Os02g17500 | Os02g0274900 | - | Detail |
| C2H2g16988 | 2:9,123,672-9,124,927 | + | C1H2g27766 | CX2g021332 | LOC_Os02g17520 | Os02g0275100 | - | Detail |
| C2H2g25493 | 2:9,125,762-9,131,981 | - | C1H2g18414 | CX2g022654 | LOC_Os02g17534 | Os02g0275200 | - | Detail |
| C2H2g12406 | 2:9,138,853-9,140,072 | + | C1H2g18414 | CX2g022654 | LOC_Os02g17590 | - | - | Detail |
| C2H2g19414 | 2:9,144,370-9,146,293 | + | C1H2g18414 | CX2g022452 | LOC_Os02g17534 | Os02g0275200 | - | Detail |
| C2H2g11418 | 2:9,153,298-9,161,883 | - | C1H2g28570 | CX2g024094 | LOC_Os02g17620 | Os02g0276200 | - | Detail |
| C2H2g13253 | 2:9,188,438-9,191,184 | - | C1H2g09318 | CX2g019729 | LOC_Os02g17640 | Os02g0276400 | - | Detail |
| C2H2g02640 | 2:9,192,146-9,200,452 | - | C1H2g06211 | CX2g023106 | LOC_Os02g17650 | Os02g0276500 | OsVTE1 | Detail |
| C2H2g17601 | 2:9,224,532-9,226,293 | - | - | - | - | - | - | Detail |
| C2H2g21214 | 2:9,227,200-9,234,095 | - | C1H2g04949 | CX2g020993 | LOC_Os02g17680 | Os02g0276900 | - | Detail |
| C2H2g16961 | 2:9,244,502-9,246,511 | - | - | - | - | - | - | Detail |
| C2H2g07248 | 2:9,245,242-9,247,742 | + | C1H2g26261 | CX2g020060 | LOC_Os11g06800 | Os02g0231600 | - | Detail |
| C2H2g23233 | 2:9,251,488-9,256,684 | + | C1H2g06748 | CX2g023495 | LOC_Os02g17700 | Os02g0277600 | - | Detail |
| C2H2g21422 | 2:9,257,574-9,260,172 | - | C1H2g21417 | CX2g019451 | LOC_Os02g17710 | Os02g0277700 | - | Detail |
| C2H2g09294 | 2:9,267,786-9,272,819 | + | C1H2g04601 | CX2g022207 | LOC_Os02g17760 | Os02g0278400 | - | Detail |
| C2H2g18932 | 2:9,270,435-9,271,883 | - | - | - | - | Os02g0278450 | - | Detail |
| C2H2g03135 | 2:9,276,565-9,287,809 | - | C1H2g04831 | CX2g024821 | LOC_Os02g17780 | Os02g0278700 | OsCPS1, OsCPS1<sub>ent</sub> | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048021 | 7:18,793,500-18,795,541 | + | C1H7g30147 | C2H7g06512 | LOC_Os07g38240 | Os07g0569700 | SAP16, OsSAP16 | Detail |
| CX7g049938 | 7:18,798,686-18,800,266 | - | - | - | - | - | - | Detail |
| CX7g049573 | 7:18,806,218-18,822,771 | - | C1H7g19531 | C2H7g28954 | LOC_Os07g38260 | Os07g0570100 | - | Detail |
| CX7g050239 | 7:18,824,095-18,840,860 | - | C1H7g19531 | C2H7g28954 | LOC_Os07g38270 | Os07g0570300 | - | Detail |
| CX7g046084 | 7:18,842,332-18,842,493 | + | - | - | - | - | - | Detail |
| CX7g048716 | 7:18,846,628-18,847,005 | - | C1H7g01635 | C2H7g26626 | LOC_Os07g38290 | Os07g0570550 | - | Detail |
| CX7g048383 | 7:18,853,276-18,857,501 | + | C1H7g14068 | C2H7g25377 | LOC_Os07g38300 | Os07g0570700 | - | Detail |
| CX7g050410 | 7:18,866,385-18,870,405 | - | C1H7g21795 | C2H7g26538 | LOC_Os07g38310 | Os07g0571000 | - | Detail |
| CX7g049919 | 7:18,873,092-18,879,119 | - | C1H7g04151 | C2H7g14088 | LOC_Os07g38360 | Os07g0571100 | - | Detail |
| CX7g049193 | 7:18,882,603-18,882,890 | - | - | - | LOC_Os07g38370 | Os07g0571300 | - | Detail |
| CX7g050054 | 7:18,901,684-18,905,932 | - | C1H7g07708 | C2H7g26302 | LOC_Os07g38380 | Os07g0571500 | - | Detail |
| CX7g050264 | 7:18,908,112-18,910,265 | - | C1H7g01313 | C2H7g26689 | LOC_Os07g38390 | Os07g0571600 | - | Detail |
| CX7g048036 | 7:18,912,823-18,916,167 | - | C1H7g26230 | C2H7g00268 | LOC_Os07g38400 | Os07g0571700 | - | Detail |
| CX7g047043 | 7:18,917,706-18,918,736 | + | C1H7g06577 | C2H7g06431 | LOC_Os07g38410 | Os07g0571800 | - | Detail |
| CX7g048183 | 7:18,919,220-18,921,780 | - | C1H7g06514 | C2H7g10161 | LOC_Os07g38420 | Os07g0571900 | - | Detail |
| CX7g048711 | 7:18,922,903-18,925,096 | + | C1H7g05779 | C2H7g29627 | LOC_Os07g38430 | Os07g0572000 | OsWDR5b | Detail |
| CX7g046812 | 7:18,926,882-18,931,008 | + | C1H7g22431 | C2H7g24214 | - | Os07g0572100 | - | Detail |
| CX7g048703 | 7:18,939,190-18,939,969 | + | C1H7g08436 | - | LOC_Os07g38460 | Os07g0572300 | - | Detail |
| CX7g048882 | 7:18,942,574-18,942,921 | + | C1H7g22876 | C2H7g08684 | LOC_Os07g38470 | Os07g0572400 | - | Detail |
| CX7g046468 | 7:18,944,403-18,945,927 | + | C1H7g14715 | C2H7g14265 | LOC_Os07g38480 | Os07g0572500 | - | Detail |