| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27777 | 1:26,903,577-26,904,881 | + | C2H1g14542 | CX1g000877 | LOC_Os01g52380 | Os01g0721800 | - | Detail |
| C1H1g16429 | 1:26,907,034-26,909,887 | - | C2H1g03938 | CX1g001695 | LOC_Os01g52390 | Os01g0721900 | - | Detail |
| C1H1g19540 | 1:26,913,451-26,917,004 | + | C2H1g29212 | CX1g005554 | LOC_Os01g52400 | Os01g0722100 | - | Detail |
| C1H1g14417 | 1:26,925,623-26,927,295 | + | C2H1g15644 | CX1g004391 | LOC_Os01g52410 | Os01g0722300 | Os2R_MYB14 | Detail |
| C1H1g17552 | 1:26,938,467-26,942,242 | + | C2H1g14945 | CX1g002677 | LOC_Os01g52450 | Os01g0722700 | OsHXK9 | Detail |
| C1H1g17968 | 1:26,946,286-26,949,083 | - | C2H1g16107 | CX1g001570 | LOC_Os01g52470 | Os01g0723000 | - | Detail |
| C1H1g22223 | 1:26,951,203-26,952,076 | + | C2H1g09375 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C1H1g00329 | 1:26,952,184-26,952,905 | + | C2H1g00796 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C1H1g27397 | 1:26,953,685-26,955,175 | - | C2H1g00282 | CX1g004240 | LOC_Os01g52490 | Os01g0723200 | - | Detail |
| C1H1g18013 | 1:26,962,480-26,968,150 | + | C2H1g25823 | CX1g001850 | LOC_Os01g52500 | Os01g0723400 | NADP-ME2, Os-NADP-ME2, Os-NADP-ME2-2 | Detail |
| C1H1g17264 | 1:26,969,834-26,975,477 | + | C2H1g08871 | CX1g003519 | LOC_Os01g52514 | Os01g0723500 | - | Detail |
| C1H1g03740 | 1:26,976,986-26,981,316 | + | C2H1g17638 | CX1g004209 | LOC_Os01g52530 | Os01g0723600 | - | Detail |
| C1H1g09315 | 1:26,983,980-26,987,890 | + | C2H1g22241 | CX1g004680 | LOC_Os01g52540 | Os01g0723700 | - | Detail |
| C1H1g17060 | 1:26,988,103-26,994,535 | - | C2H1g23039 | CX1g004575 | LOC_Os01g52550 | Os01g0723800 | - | Detail |
| C1H1g18463 | 1:27,012,831-27,022,129 | + | C2H1g05862 | CX1g004747 | LOC_Os01g52560 | Os01g0724500 | - | Detail |
| C1H1g09116 | 1:27,038,700-27,046,564 | + | C2H1g26023 | CX1g002347 | LOC_Os01g52610 | Os01g0725400 | - | Detail |
| C1H1g01881 | 1:27,047,370-27,050,594 | + | C2H1g19762 | CX1g003740 | LOC_Os01g52630 | Os01g0725600 | - | Detail |
| C1H1g28016 | 1:27,055,008-27,060,104 | + | C2H1g12468 | CX1g000922 | LOC_Os01g52640 | Os01g0725800 | - | Detail |
| C1H1g01009 | 1:27,060,442-27,061,041 | - | C2H1g25269 | CX1g004829 | LOC_Os01g52650 | Os01g0725900 | - | Detail |
| C1H1g26602 | 1:27,063,887-27,064,616 | - | C2H1g28455 | CX1g001737 | LOC_Os01g52660 | Os01g0726100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX7g048021 | 7:18,793,500-18,795,541 | + | C1H7g30147 | C2H7g06512 | LOC_Os07g38240 | Os07g0569700 | SAP16, OsSAP16 | Detail |
| CX7g049938 | 7:18,798,686-18,800,266 | - | - | - | - | - | - | Detail |
| CX7g049573 | 7:18,806,218-18,822,771 | - | C1H7g19531 | C2H7g28954 | LOC_Os07g38260 | Os07g0570100 | - | Detail |
| CX7g050239 | 7:18,824,095-18,840,860 | - | C1H7g19531 | C2H7g28954 | LOC_Os07g38270 | Os07g0570300 | - | Detail |
| CX7g046084 | 7:18,842,332-18,842,493 | + | - | - | - | - | - | Detail |
| CX7g048716 | 7:18,846,628-18,847,005 | - | C1H7g01635 | C2H7g26626 | LOC_Os07g38290 | Os07g0570550 | - | Detail |
| CX7g048383 | 7:18,853,276-18,857,501 | + | C1H7g14068 | C2H7g25377 | LOC_Os07g38300 | Os07g0570700 | - | Detail |
| CX7g050410 | 7:18,866,385-18,870,405 | - | C1H7g21795 | C2H7g26538 | LOC_Os07g38310 | Os07g0571000 | - | Detail |
| CX7g049919 | 7:18,873,092-18,879,119 | - | C1H7g04151 | C2H7g14088 | LOC_Os07g38360 | Os07g0571100 | - | Detail |
| CX7g049193 | 7:18,882,603-18,882,890 | - | - | - | LOC_Os07g38370 | Os07g0571300 | - | Detail |
| CX7g050054 | 7:18,901,684-18,905,932 | - | C1H7g07708 | C2H7g26302 | LOC_Os07g38380 | Os07g0571500 | - | Detail |
| CX7g050264 | 7:18,908,112-18,910,265 | - | C1H7g01313 | C2H7g26689 | LOC_Os07g38390 | Os07g0571600 | - | Detail |
| CX7g048036 | 7:18,912,823-18,916,167 | - | C1H7g26230 | C2H7g00268 | LOC_Os07g38400 | Os07g0571700 | - | Detail |
| CX7g047043 | 7:18,917,706-18,918,736 | + | C1H7g06577 | C2H7g06431 | LOC_Os07g38410 | Os07g0571800 | - | Detail |
| CX7g048183 | 7:18,919,220-18,921,780 | - | C1H7g06514 | C2H7g10161 | LOC_Os07g38420 | Os07g0571900 | - | Detail |
| CX7g048711 | 7:18,922,903-18,925,096 | + | C1H7g05779 | C2H7g29627 | LOC_Os07g38430 | Os07g0572000 | OsWDR5b | Detail |
| CX7g046812 | 7:18,926,882-18,931,008 | + | C1H7g22431 | C2H7g24214 | - | Os07g0572100 | - | Detail |
| CX7g048703 | 7:18,939,190-18,939,969 | + | C1H7g08436 | - | LOC_Os07g38460 | Os07g0572300 | - | Detail |
| CX7g048882 | 7:18,942,574-18,942,921 | + | C1H7g22876 | C2H7g08684 | LOC_Os07g38470 | Os07g0572400 | - | Detail |
| CX7g046468 | 7:18,944,403-18,945,927 | + | C1H7g14715 | C2H7g14265 | LOC_Os07g38480 | Os07g0572500 | - | Detail |